Back

Challenging a role for ceramide channels and microdomains in apoptosis induction using a bottom-up approach

Wessing, M.; Klassen, S.; Fiedler, B.; Cosentino, K.; Holthuis, J. C. M.

2025-11-14 biochemistry
10.1101/2025.11.14.688508 bioRxiv
Show abstract

Ceramides are essential but potentially toxic intermediates of sphingolipid metabolism that can act directly on mitochondria to trigger apoptotic cell death, but the underlying mechanism is unclear. While one model postulates that ceramides form stable channels in the outer mitochondrial membrane that induce cell death through direct release of cytochrome c, an alternative view is that ceramides self-assemble into microdomains that facilitate membrane insertion and oligomerization of the pro-apoptotic Bcl-2 protein Bax into cytochrome c-conducting pores. To challenge these models, we here analyzed the influence of ceramides in combination with recombinant Bax on the leakiness of model membranes. We show that ceramides on their own are unable to support membrane passage of even the smallest fluorescence markers. Moreover, we find that ceramides cannot substitute for cardiolipin in facilitating membrane recruitment of Bax and its subsequent assembly into functional pores. Our data argue against a direct role of ceramides in apoptotic pore formation and indicate that the mechanism by which ceramides initiate permeabilization of the outer mitochondrial membrane is independent of ceramide channels or ceramide acting autonomously as translocation platform for Bax.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
Cellular and Molecular Life Sciences
96 papers in training set
Top 0.1%
12.4%
2
Journal of Biological Chemistry
690 papers in training set
Top 0.8%
9.5%
3
Journal of Molecular Biology
232 papers in training set
Top 0.3%
6.6%
4
The FEBS Journal
93 papers in training set
Top 0.1%
6.1%
5
EMBO Reports
263 papers in training set
Top 0.5%
6.1%
6
eLife
5828 papers in training set
Top 19%
6.1%
7
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
29 papers in training set
Top 0.1%
3.4%
50% of probability mass above
8
Biomaterials
84 papers in training set
Top 0.6%
3.2%
9
Biochimica et Biophysica Acta (BBA) - Biomembranes
36 papers in training set
Top 0.1%
3.2%
10
Communications Biology
993 papers in training set
Top 7%
2.7%
11
Biophysical Journal
631 papers in training set
Top 2%
2.6%
12
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 20%
2.6%
13
International Journal of Molecular Sciences
494 papers in training set
Top 5%
2.4%
14
Nature Communications
5641 papers in training set
Top 41%
2.3%
15
PLOS ONE
5266 papers in training set
Top 46%
2.1%
16
Biochemical Journal
91 papers in training set
Top 0.6%
2.1%
17
Scientific Reports
3612 papers in training set
Top 56%
1.7%
18
Journal of Cell Biology
392 papers in training set
Top 3%
1.1%
19
Frontiers in Cell and Developmental Biology
233 papers in training set
Top 4%
1.1%
20
Advanced Science
286 papers in training set
Top 7%
1.1%
21
Biochemistry
148 papers in training set
Top 2%
1.1%
22
Journal of Cell Science
393 papers in training set
Top 4%
1.0%
23
iScience
1154 papers in training set
Top 36%
0.8%
24
Protein Science
246 papers in training set
Top 4%
0.8%
25
Cells
249 papers in training set
Top 7%
0.8%
26
The FASEB Journal
194 papers in training set
Top 6%
0.8%
27
Journal of Lipid Research
39 papers in training set
Top 0.6%
0.8%
28
Science Advances
1243 papers in training set
Top 31%
0.8%
29
ChemBioChem
55 papers in training set
Top 1%
0.6%
30
Small
78 papers in training set
Top 2%
0.6%