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Human Coronavirus HKU1 Neutralizing Monoclonal Antibodies Target Diverse Epitopes Within and Around the TMPRSS2 Receptor Binding Site

Wang, L.; Joseph, J.; Vasquez, S.; Wrapp, D.; Sheahan, T. P.; Dzuvor, C. K. O.; Rosen, O.; Kirchdoerfer, R.; Abiona, O. M.; Hammond, C.; Shi, W.; Moak, S. P.; Kong, W.-P.; Zhang, Y.; Eso, M. R.; Brown, A. J.; Ward, A.; Baric, R. S.; McLellan, J. S.; Pierson, T. C.; Mascola, J.; Graham, B. S.; Yassine, H.; Barnes, C. O.; Corbett-Helaire, K. S.

2025-10-30 microbiology
10.1101/2025.10.29.685445 bioRxiv
Show abstract

Endemic human coronaviruses (HCoVs), like HCoV-HKU1, account for [~]30% of common cold/year and can cause serious upper and lower respiratory infections, yet no licensed vaccines target HCoVs. In fact, little is known about HCoV-HKU1s antigenic landscape. Thus, we characterized key interactions between HCoV-HKU1 spike (S) with monoclonal antibodies (mAbs) isolated from pre-pandemic HCoV-HKU1 convalescent PBMCs. We isolated 14 mAbs, which bound distinct S regions: receptor binding domain (RBD), N-terminal domain (NTD), and S2 subunit. Structural and functional studies revealed three groups of RBD-specific mAbs targeting diverse footprints within and around the TMPRSS2 receptor binding site, exemplified by: (1) The most potently neutralizing mAb, H501-022 (IC50 = 0.01 {micro}g/mL), which recognizes the TMPRSS2 binding motif, thereby blocking receptor engagement; (2) mAb H501-008 (IC50 = 0.05 {micro}g/mL) that binds a conserved, cross-reactive epitope outside of the TMPRSS2 binding site that is shared with HCoV-OC43; and (3) H501-018 (IC50 = 0.28 {micro}g/mL) that recognizes both "up" and "down" RBD conformations at a distinct, non-overlapping site outside of the TMPRSS2 binding motif, distinguishing itself from H501-022 and H501-008, which bind exclusively to the "up" RBD conformation. These mAbs represent the first type-specific HCoV-HKU1 mAbs isolated from a convalescent donor. Our findings provide molecular insight into HCoV-HKU1 antibody recognition and neutralization mechanisms, importantly highlighting antigenic differences comparing HCoVs and pandemic CoVs - a critical step towards advancing universal CoV vaccine design.

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