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Biosynthesis of Kaitocephalin: A Neuroprotective Natural Product Featuring a Peptide-Like yet Non-Peptidic Scaffold

Maeno, Y.; Shiraishi, T.; Saito, N.; Maruyama, J.-i.; Shin-ya, K.; Kuzuyama, T.

2025-10-18 biochemistry
10.1101/2025.10.18.683206 bioRxiv
Show abstract

Kaitocephalin (KCP, 1) is a neuroprotective natural product that acts as an antagonist of ionotropic glutamate receptors, making it a highly promising lead for drug discovery. It possesses a unique scaffold composed of three amino acids connected via C-C bonds, which appears peptide-like but is formed without peptide bonds. In this study, we identified the KCP biosynthetic gene cluster (kpb cluster) in the producing fungus Eupenicillium shearii through integrated genomic and transcriptomic analyses. LC-MS/MS profiling and chemical derivatization of E. shearii extracts led to the discovery of four novel pathway-related metabolites (2-5). In vitro enzymatic assays with 2(S)-dechlorokaito lactate (4) as a substrate enabled functional characterization of KpbI, KpbM, and KpbB involved in KCP formation. Among them, the dioxygenase KpbI was found to catalyze an unprecedented two-step oxidation to form the D-serine moiety. In addition, isotope tracing experiments provided new insights into the origin of the L-proline moiety. These findings establish a foundation for future studies aimed at elucidating the complete biosynthetic mechanism of KCP. Table of Contents graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=50 SRC="FIGDIR/small/683206v1_ufig1.gif" ALT="Figure 1"> View larger version (12K): org.highwire.dtl.DTLVardef@189618aorg.highwire.dtl.DTLVardef@62d5deorg.highwire.dtl.DTLVardef@c71341org.highwire.dtl.DTLVardef@1c14e59_HPS_FORMAT_FIGEXP M_FIG C_FIG

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