Modeling and Tracking of Heterogeneous Cell Populations via Open Multi-Agent Systems
Tramaloni, A.; Testa, A.; Avnet, S.; Massari, S.; Di Pompo, G.; Baldini, N.; Notarstefano, G.
Show abstract
Understanding cellular dynamics represents a critical challenge in biomedical research. Optical microscopy remains a key technique for observing live-cell behaviors in vitro. This paper introduces an enhanced cell-tracking algorithm designed to address dynamic changes in cell populations, including mitosis, migration, and cell-cell interactions, even within complex co-culture models. The proposed method involves three main steps: 1)modeling the movements and interactions of different cell types in co-culture experiments via tailored open multi-agent systems; 2)identifying parameters via real data for a multi-agent, multi-culture framework; 3) embedding the model within an Extended Kalman Filter, to predict the dynamics of heterogeneous cell populations across video frames. To validate the approach, we used a novel dataset involving the interplay between tumor and normal cells, namely osteosarcoma and mesenchymal stromal cells, respectively. This dataset offers a challenging and clinically relevant framework to track cell proliferation and study how cancer cells evolve and interact with stromal cells within their surroundings. Performance metrics demonstrated the effectiveness of the algorithm over state-of-the-art methodologies, highlighting its ability to track heterogeneous cell types, capture their interactions, and generate the estimated cell lineage tree.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Leveraging agent-based models and deep reinforcement learning to predict taxis in cell migration: Insights from barotaxis 94%
- Robust parameter estimation and identifiability analysis with Hybrid Neural Ordinary Differential Equations in Computational Biology 93%
- Biochemical implementation of acceleration sensing and PIDA control (Extended Version) 93%
Similar papers in this journal
- Collective Evolution Learning Model for Vision-Based Collective Motion with Collision Avoidance 95%
- Prediction of Covid-19 spreading and optimal coordination of counter-measures: From microscopic to macroscopic models to Pareto fronts 94%
- ConfluentFUCCI for fully-automated analysis of cell-cycle progression in a highly dense collective of migrating cells 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.