Single-cell mass accumulation reveals bacterioplankton growth rate in native seawater
Wu, Y.; Roller, B. R. K.; Hellerschmied, C.; Sichert, A.; Gomez, A.; Bartlau, N.; Seneca Cardoso da Silva, J.; Danilyan, E.; Wolfram, M.; Mussmann, M.; Miettinen, T. P.; Polz, M. F.; Manalis, S.
Show abstract
AO_SCPLOWBSTRACTC_SCPLOWThe growth of marine microbial communities drives biogeochemical cycling of carbon and other elements, yet the growth rates of individual species within complex ocean ecosystems remain poorly understood. In particular, the coexistence of a large diversity of copiotrophic bacteria, which are capable of fast growth but typically remain at low abundance, has been interpreted as a feast or famine existence. Here we show that contrary to the notion of infrequent growth, Vibrio bacteria exhibited consistent growth rates in coastal ocean samples, despite representing only a small fraction of the total community. These observations were enabled by a suspended microchannel resonator (SMR), which we adapted to function as a single-cell chemostat. By maintaining a continuous supply of native seawater around each trapped cell, we prevented nutrient depletion and used the SMRs high mass precision to resolve growth rates that are otherwise undetectable. Vibrio species displayed significantly larger cell mass and faster growth than other community members across samples collected at different temporal intervals from days to years. Surprisingly, their growth was consistently limited by carbon, contrary to the expectation that heterotrophic bacteria in the euphotic zone would be limited by nitrogen and phosphorus due to competition with algae. The correlation between cell mass and growth rate of Vibrionaceae in seawater followed established growth laws derived from laboratory conditions, suggesting that growth physiology observed in pure cultures is applicable to wild bacterial populations. Overall, our findings suggest that rare species may play a disproportionately large role in the marine carbon cycle, with rapid biomass turnover driven by a combination of high growth rates balanced by intense predation.
Matching journals
The top 3 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Testing the priming effect in the deep ocean: are microbes too starved to consume recalcitrant organic carbon? 97%
- Environmental and taxonomic drivers of bacterial extracellular vesicle production in marine ecosystems 97%
- Expanding the diversity of bacterioplankton isolates and modeling isolation efficacy with large scale dilution-to-extinction cultivation 96%
Similar papers in this journal
- Gulf of Mexico blue hole harbors high levels of novel microbial lineages 97%
- Selective carbon sources influence the end-products of microbial nitrate respiration 96%
- Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification 95%
Similar papers in this journal
Similar papers in this journal
- Meta-omics reveals role of photosynthesis in Microbially Induced Carbonate Precipitation at a CO2-rich Geyser 96%
- Correlative SIP-FISH-Raman-SEM-NanoSIMS links identity, morphology, biochemistry, and physiology of environmental microbes 95%
- New isolates refine the ecophysiology of the Roseobacter CHAB-I-5 lineage 95%
Similar papers in this journal
- Prochlorococcus rely on microbial interactions rather than on chlorotic resting stages to survive long-term nutrient starvation 97%
- DNA and RNA-SIP reveal Nitrospira spp. as key drivers of nitrification in groundwater-fed biofilters 96%
- Atribacteria reproducing over millions of years in the Atlantic abyssal subseafloor 96%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.