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CRISPR activation screen uncovers MARCKSL1 as a gauge for extracellular vesicle secretion.

Zhong, Y.; George, A. E.; Liv, N.; de Heus, C.; Tjokrodirijo, R. T. N.; Messchendorp, M.; Akkermans, J. J. L.; Cabukusta, B.; Janssen, G.; van Veelen, P. A.; Wijdeven, R. H. M.; Neefjes, J.; Verweij, F. J.; Berlin, I.

2025-07-25 cell biology
10.1101/2025.07.24.665424 bioRxiv
Show abstract

Extracellular vesicles (EVs) are crucial mediators of intercellular communication that originate through one of two pathways: outward budding of the plasma membrane (PM) or fusion of mature (late) endosomes with the PM. How cells balance these EV biogenesis routes remains unclear. To address this, we performed a genome-wide CRISPR activation screen for genes that increase cell surface levels of the tetraspanin CD63--an EV marker that shuttles between late endosomes and the PM. This unbiased approach identified a membrane adaptor protein, MARCKSL1, commonly upregulated in diverse tumor types. Follow-up studies, integrating genomic activation/ablation with microscopic and proteomic approaches, revealed that MARCKSL1 potentiates EV secretion from the PM, (in part) at the expense of late endosome--PM fusion. Probing the molecular context of MARCKSL1 function, we implicate PM-bridging cytoskeletal components (e.g., Radixin) and SNARE-associated proteins (e.g., STXBP3) as collaborators of MARCKSL1. Collectively, our findings reveal new mechanistic underpinnings of PM remodeling and position MARCKSL1 as a gauge between different platforms of EV biogenesis.

Published in Cell Reports (predicted rank #4) · training set

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