Global inhibition of deadenylation stabilizes the transcriptome in mitotic cells
Khalizeva, E.; Latifkar, A.; Bartel, D.; Ly, J.; Cheeseman, I. M.
Show abstract
In the presence of cell division errors, mammalian cells can pause in mitosis for tens of hours with little to no transcription, while still requiring continued translation for viability. These unique aspects of mitosis require substantial adaptations to the core gene expression programs. Indeed, during interphase, the homeostatic control of mRNA levels involves a constant balance of transcription and degradation, with a median mRNA half-life of [~]2-4 hours. If such short mRNA half-lives persisted in mitosis, cells would be expected to quickly deplete their transcriptome in the absence of new transcription. Here, we report that the transcriptome is globally stabilized during prolonged mitotic delays. Typical mRNA half-lives are increased >4-fold in mitosis compared to interphase, thereby buffering mRNA levels in the absence of new synthesis. Moreover, the poly(A)-tail-length profile of mRNAs changes in mitosis, strongly suggesting a mitotic repression of deadenylation. We further show that mRNA stabilization in mitosis is dependent on cytoplasmic poly(A)-binding proteins PABPC1&4. Depletion of PABPC1&4 disrupts the maintenance of mitotic arrest, highlighting the critical physiological role of mitotic transcriptome buffering. HighlightsO_LIThe cellular transcriptome is globally stabilized during prolonged mitotic arrest C_LIO_LIDistinct poly(A)-tail-length profile of mRNAs in mitosis suggests repression of deadenylation C_LIO_LImRNA stabilization in mitosis is dependent on PABPC1 and PABPC4 C_LIO_LIDegradation of mRNAs during mitosis compromises maintenance of mitotic arrest C_LI
Matching journals
The top 4 journals account for 50% of the predicted probability mass.
Similar papers in this journal
Similar papers in this journal
Similar papers in this journal
- SLAMseq resolves the kinetics of maternal and zygotic gene expression in early zebrafish embryogenesis 96%
- Mandatory coupling of zygotic transcription to DNA replication in early Drosophila embryos 95%
- Ribosome collision sensor Hel2 recognizes mistargeting secretory ribosome-nascent chain complexes 95%
Similar papers in this journal
Similar papers in this journal
- A conserved choreography of mRNAs at centrosomes reveals a localization mechanism involving active polysome transport 97%
- PYM1 limits non-canonical Exon Junction Complex occupancy in a gene architecture dependent manner to tune mRNA expression 96%
- The control of transcriptional memory by stable mitotic bookmarking 96%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.