Beyond Reorganization: Intrinsic cortical hierarchies constrain experience-dependent plasticity in sensory-deprived humans

Innate cortical organisation and postnatal sensory experience interact dynamically to shape the functional architecture of the human brain. Using naturalistic stimulation, functional gradient analyses, and comparative approaches in congenitally blind, congenitally deaf, and typically developed individuals, we investigated how intrinsic hierarchical structures and sensory experiences influence cortical organisation. Our findings demonstrate that the principal functional gradients spanning from unimodal sensory to transmodal association cortices are consistently preserved across all groups, suggesting a robust genetically determined cortical scaffold. Nonetheless, congenital sensory deprivation selectively reshapes the geometry of modality-specific gradients, characterised by reduced functional differentiation within sensory-deprived cortical regions. These geometric contractions promote experience-driven plastic reorganization, enabling deprived sensory areas to establish enhanced functional connectivity with transmodal and non-deprived sensory cortices. Critically, this reorganisation aligns systematically with pre-existing cortical gradients, highlighting intrinsic hierarchical constraints that guide experience-dependent plasticity. Moreover, sensory-deprived regions exhibiting heightened connectivity actively engage in processing structured perceptual information from intact modalities, reflecting specific feature-driven cross-modal adaptations. Collectively, these results underscore a fundamental duality in cortical organisation: innate hierarchical principles impose constraints on cortical architecture, while sensory experience drives adaptive refinement, demonstrating the brains intrinsic capacity for flexible functional reconfiguration in response to sensory deprivation.