Back

Genome-wide association study reveals KCNQ3 gene as a risk factor for fear-related behavior in dogs and zebrafish

Kubinyi, E.; Sandor, S.; Tatrai, K.; Varga, Z.; Varga, Z. K.; Topal, J.; Varga, M.; Jonas, D.; Turcsan, B.

2025-05-11 animal behavior and cognition
10.1101/2025.05.07.652122 bioRxiv
Show abstract

Freezing behavior, characterised by attentive immobility as a reaction to a perceived threat, is widely studied in the context of fear, anxiety and stress. To uncover the genetic factors underlying this behavior, we conducted a genome-wide association study (GWAS) in kennel-housed beagle dogs. Our analysis identified a single-nucleotide polymorphism (SNP) in intron 5 of the KCNQ3 gene on chromosome 13 associated with freezing behavior in response to unfamiliar environments and people. To validate this finding, we used a zebrafish model, where CRISPR/Cas9-induced kcnq3 deficiencies led to heightened fear and arousal in two behavioral tests. KCNQ3 is implicated in several neurodevelopmental and psychiatric disorders, and our results highlight its evolutionarily conserved role in modulating fear responses. In dogs, an enriched environment can mitigate the adverse effects of KCNQ3 deficiency by reducing threat perception, highlighting the role of gene-environment interactions in shaping behavioral responses. TeaserKCNQ3 influences fear responses across species, with gene-environment interactions shaping freezing behavior in dogs.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

50% of probability mass above

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.