Back

Phospholipid Scramblases TMEM16F and Xkr8 regulate distinct features of Phosphatidylserine (PS) externalization and immune regulation in the tumor microenvironment to regulate tumor growth

Birge, R. B.; Gadiyar, V.; Pulica, R.; Aquib, A.; Tranos, J. A.; Varsanyi, C.; Almansa, L. F.; Gaspers, L.; De Lorenzo, M.; Kotenko, S. V.; Tripathi, S.; Howell, R. W.; Choudhary, A.; Calianese, D. C.

2025-04-18 cancer biology
10.1101/2025.04.17.649445 bioRxiv
Show abstract

The phospholipid scramblases Xkr8 and TMEM16F externalize phosphatidylserine (PS) by distinct mechanisms. Xkr8, is activated by caspase-mediated proteolytic cleavage, and in synergy with inactivation of P4-ATPase flippases, results in the irreversible externalization of PS on apoptotic cells and an "eat-me" signal for efferocytosis. In contrast, TMEM16F is a calcium activated scramblase that reversibly externalizes PS on viable cells via the transient increase in intracellular calcium in live cells. The tumor microenvironment (TME) is abundant with exposed PS, resulting from prolonged oncogenic and metabolic stresses and high apoptotic indexes of tumors. Such chronic PS externalization in the TME has been linked to host immune evasion from interactions of PS with inhibitory PS receptors such as TAM and TIM receptors. Here, in an effort to better understand the contributions of apoptotic vs live cell PS-externalization to tumorigenesis and immune evasion, we employed an E0771 orthotopic breast cancer model and genetically ablated Xkr8 and TMEM16F using CRISPR/Cas9. While neither the knockout of Xkr8 nor TMEM16F showed defects in cell intrinsic properties related to proliferation, tumor-sphere formation, and growth factor signaling, both knockouts suppressed tumorigenicity in immune-competent mice, but not in NOD/SCID or RAG-KO immune-deficient strains. Mechanistically, Xkr8-KO tumors suppressed macrophage-mediated efferocytosis, and TMEM16F-KO suppressed ER stress/calcium-induced PS externalization. Our data support an emerging idea in immune-oncology that constitutive PS externalization, mediated by scramblase dysregulation on tumor cells, supports immune evasion in the tumor microenvironment. This links apoptosis/efferocytosis and oncogenic stress involving calcium dysregulation, contributing to PS-mediated immune escape and cancer progression.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Cell Reports
1338 papers in training set
Top 0.3%
18.2%
2
Nature Communications
4913 papers in training set
Top 8%
17.2%
3
Cancer Research
116 papers in training set
Top 0.1%
14.4%
4
Oncogene
76 papers in training set
Top 0.4%
4.2%
50% of probability mass above
5
eLife
5422 papers in training set
Top 27%
3.5%
6
Cancer Cell
38 papers in training set
Top 0.6%
2.7%
7
Clinical Cancer Research
58 papers in training set
Top 0.7%
2.3%
8
Nature Cancer
35 papers in training set
Top 0.6%
2.0%
9
Journal of Clinical Investigation
164 papers in training set
Top 2%
2.0%
10
Developmental Cell
168 papers in training set
Top 7%
2.0%
11
Cancer Discovery
61 papers in training set
Top 1.0%
1.8%
12
Cell Death & Disease
126 papers in training set
Top 1%
1.7%
13
Science Advances
1098 papers in training set
Top 20%
1.5%
14
Cancer Immunology Research
34 papers in training set
Top 0.3%
1.5%
15
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 38%
1.2%
16
Cell Death & Differentiation
48 papers in training set
Top 0.4%
1.2%
17
Journal for ImmunoTherapy of Cancer
64 papers in training set
Top 0.8%
1.1%
18
Cancers
200 papers in training set
Top 4%
0.9%
19
Journal of Experimental Medicine
106 papers in training set
Top 3%
0.9%
20
The EMBO Journal
267 papers in training set
Top 4%
0.9%
21
JCI Insight
241 papers in training set
Top 6%
0.9%
22
Cancer Research Communications
46 papers in training set
Top 1%
0.8%
23
Molecular Cancer Research
42 papers in training set
Top 0.8%
0.7%
24
Science Signaling
55 papers in training set
Top 0.5%
0.7%
25
Cell Reports Medicine
140 papers in training set
Top 10%
0.6%
26
Nature Cell Biology
99 papers in training set
Top 5%
0.6%