Back

Distal Gene Expression Governed by Lamins and Nesprins via Chromatin Conformation Change

Zhang, H.; Lei, Z.; Momen-Heravi, F.; Qin, P.

2025-04-01 cell biology
10.1101/2025.04.01.646570 bioRxiv
Show abstract

The nuclear lamina is a vital structural component of eukaryotic cells, playing a pivotal role in both physiological processes, such as cell differentiation, and pathological conditions, including laminopathies and cancer metastasis. Lamina associated proteins, particularly lamins and nesprins, are integral to mechanosensing, chromatin organization, and gene regulation. However, their precise contributions to gene regulation remain incompletely understood. This study explores the functions of lamin A, LMNA, and SYNE2 in gene expression, with a particular focus on their influence on distal chromatin interactions and conformational changes. Using inducible shRNA knockdown, RNA-seq analysis, and dCas9-mediated live imaging of chromosomes, we demonstrate that lamin A affects RNA synthesis, LMNA governs chromatin spatial organization, and SYNE2 regulates chromatin modifications. Furthermore, both lamins and nesprins enhance telomere dynamics. These findings elucidate nuclear envelope-associated mechanisms in gene regulation, offering valuable insights into chromatin dynamics under both physiological and pathological contexts.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Nucleic Acids Research
1281 papers in training set
Top 0.4%
27.1%
2
Nucleus
12 papers in training set
Top 0.1%
12.1%
3
Scientific Reports
3612 papers in training set
Top 7%
8.0%
4
Nature Communications
5641 papers in training set
Top 30%
4.4%
50% of probability mass above
5
Genome Biology
637 papers in training set
Top 3%
4.1%
6
iScience
1154 papers in training set
Top 6%
3.3%
7
Life Science Alliance
285 papers in training set
Top 1%
3.2%
8
Cell Death Discovery
58 papers in training set
Top 0.3%
2.7%
9
Molecular Biology of the Cell
311 papers in training set
Top 2%
2.2%
10
Communications Biology
993 papers in training set
Top 10%
2.2%
11
Cells
249 papers in training set
Top 2%
2.2%
12
eLife
5828 papers in training set
Top 48%
1.8%
13
Frontiers in Cell and Developmental Biology
233 papers in training set
Top 3%
1.5%
14
The FASEB Journal
194 papers in training set
Top 3%
1.4%
15
Epigenetics & Chromatin
42 papers in training set
Top 0.4%
1.1%
16
Journal of Cell Biology
392 papers in training set
Top 3%
1.1%
17
Cell Cycle
17 papers in training set
Top 0.3%
1.1%
18
Journal of Cell Science
393 papers in training set
Top 4%
1.0%
19
Journal of Biological Chemistry
690 papers in training set
Top 8%
1.0%
20
Cell Reports
1498 papers in training set
Top 26%
0.9%
21
NAR Molecular Medicine
22 papers in training set
Top 0.3%
0.9%
22
International Journal of Molecular Sciences
494 papers in training set
Top 14%
0.9%
23
Cellular and Molecular Life Sciences
96 papers in training set
Top 2%
0.9%
24
Molecular and Cellular Biology
47 papers in training set
Top 1.0%
0.6%
25
Science Advances
1243 papers in training set
Top 32%
0.6%