Simplifying species interaction matrices by grouping: optimal groupings differ between effects and responses
Brown, C. R. P.; Stouffer, D. B.
Show abstract
Most ecological models of species interactions require many parameters, making them expensive to fit to experimental or observational data. To reduce the number of parameters, species are often divided into groups a priori, for example on the basis of functional or phylogenetic similarity, and species within these groups are assumed to behave identically. Here, we assess the validity of such grouping by deriving the optimal groupings a posteriori based on the fit of the Beverton-Holt model to experimental data from six species of Drosophila competing in laboratory conditions. We find evidence that grouping can indeed improve the performance (as judged by AICc) of species-interaction models, but we also observe that there is no single optimal grouping. Further, those groupings that did prove beneficial could not have been easily predicted from available species attributes, calling into question the prevailing method of a priori species grouping. Lastly, we find that species did not group equivalently in their competitive effect and in their response to competition, invalidating a key assumption often made implicitly when defining species groupings. Our study suggests the need for a different, more data-informed, approach to grouping in species-interaction models.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Disentangling key species interactions in diverse and heterogeneous communities: A Bayesian sparse modeling approach 97%
- Predictions of biodiversity are improved by integrating trait-based competition with abiotic filtering 96%
- An experimental validation test of ecological coexistence theory to forecast extinction under rising temperatures. 96%
Similar papers in this journal
- gauseR: Simple methods for fitting Lotka-Volterra models describing Gause's "Struggle for Existence" 96%
- Rethinking the nature of intraspecific variability and its consequences on species coexistence 95%
- Failure to meet the exchangeability assumption in Bayesian multispecies occupancy models: Implications for study design 95%
Similar papers in this journal
- Finding missing links in interaction networks 96%
- Inferring ecological selection from multidimensional community trait distributions along environmental gradients 94%
- Multi-species mechanistic model of functional response provides new insights into predator-mediated interactions in a vertebrate community 94%
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.