Back

Transcriptional Landscape of THAP9 across Oligodendrocyte Developmental Stages: Molecular Mechanisms and Network Analysis

Bhardwaj, T.; Patel, D.; Majumdar, S.

2025-01-20 genomics
10.1101/2025.01.17.633638 bioRxiv
Show abstract

Oligodendrocyte maturation and myelination are critical processes in human neurodevelopment, and their dysregulation is linked to numerous neurological disorders. While model organisms have provided insight into these processes, human-specific regulatory mechanisms remain poorly understood. This study investigated human THAP9, a protein homologous to the Drosophila P-element transposase, whose function in oligodendrocytes remains unknown. An analysis of publicly available RNA-sequencing data and H3K27ac ChIP-sequencing data from oligodendrocyte progenitor cells (OPCs) and mature oligodendrocytes (MOs) revealed significant upregulation of THAP9 during oligodendrocyte maturation. Co-expression analysis demonstrated a strong correlation with established markers of oligodendrocyte development, including myelin-associated genes (MOG, MBP) and key transcriptional regulators (PDGFRA, SOX5, SOX6, SOX11). THAP9 lacks homologues in mice, highlighting potential human-specific mechanisms in oligodendrocyte development and emphasising the importance of studying species-specific factors in neurodevelopment. Our findings suggest that THAP9 is a novel human-specific regulator of oligodendrocyte maturation and opens new avenues for studying myelination disorders.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
Scientific Reports
3612 papers in training set
Top 1%
15.0%
2
Molecular Omics
23 papers in training set
Top 0.1%
11.8%
3
Glia
81 papers in training set
Top 0.1%
9.7%
4
International Journal of Molecular Sciences
494 papers in training set
Top 1.0%
6.2%
5
BMC Genomics
406 papers in training set
Top 1%
5.4%
6
Communications Biology
993 papers in training set
Top 4%
4.0%
50% of probability mass above
7
iScience
1154 papers in training set
Top 4%
4.0%
8
Nature Communications
5641 papers in training set
Top 40%
2.4%
9
BMC Biology
265 papers in training set
Top 1%
2.4%
10
Epigenetics
50 papers in training set
Top 0.3%
2.1%
11
Life Science Alliance
285 papers in training set
Top 3%
2.0%
12
eLife
5828 papers in training set
Top 49%
1.7%
13
Genome Research
468 papers in training set
Top 4%
1.5%
14
Frontiers in Cell and Developmental Biology
233 papers in training set
Top 3%
1.5%
15
PLOS Genetics
862 papers in training set
Top 8%
1.4%
16
Translational Psychiatry
260 papers in training set
Top 3%
1.4%
17
Epigenetics & Chromatin
42 papers in training set
Top 0.4%
1.3%
18
Genomics
64 papers in training set
Top 1%
1.1%
19
Molecular Medicine
11 papers in training set
Top 0.2%
1.1%
20
Cells
249 papers in training set
Top 5%
1.1%
21
Frontiers in Genetics
230 papers in training set
Top 5%
1.0%
22
Genes
144 papers in training set
Top 3%
1.0%
23
PLOS ONE
5266 papers in training set
Top 59%
1.0%
24
Genome Biology
637 papers in training set
Top 8%
0.9%
25
Frontiers in Immunology
638 papers in training set
Top 10%
0.8%
26
Nucleic Acids Research
1281 papers in training set
Top 14%
0.8%
27
Cell Reports
1498 papers in training set
Top 27%
0.8%
28
Molecular Psychiatry
282 papers in training set
Top 5%
0.8%
29
Computational and Structural Biotechnology Journal
242 papers in training set
Top 8%
0.6%
30
Aging Cell
165 papers in training set
Top 3%
0.6%