Back

Self-organized and self-sustained ensemble activity patterns in simulation of mouse primary motor cortex

Doherty, D. W.; Jung, J.; Dura-Bernal, S.; Lytton, W. W.

2025-01-14 neuroscience
10.1101/2025.01.13.632866 bioRxiv
Show abstract

The idea of self-organized signal processing in the cerebral cortex has become a focus of research since Beggs and Plentz 1 reported avalanches in local field potential recordings from organotypic cultures and acute slices of rat somatosensory cortex. How the cortex intrinsically organizes signals remains unknown. A current hypothesis was proposed by the condensed matter physicists Bak, Tang, and Wiesenfeld 2 when they conjectured that if neuronal avalanche activity followed inverse power law distributions, then brain activity may be set around phase transitions within self-organized signals. We asked if we would observe self-organized signals in an isolated slice of our data driven detailed simulation of the mouse primary motor cortex? If we did, would we observe avalanches with power-law distributions in size and duration and what would they look like? Our results demonstrate that a brief unstructured stimulus (100ms, 57A current) to a small subset of neurons (about 181 of more than 10,000) in a simulated mouse primary motor cortex slice results in self-organized and self-sustained avalanches with power-law size and duration distributions and values similar to those reported from in vivo and in vitro experiments. We observed 4 cross-layer and cross-neuron population patterns, 3 of which displayed a dominant rhythmic component. Avalanches were each composed of one or more of the 4 population patterns.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
Physical Review Letters
43 papers in training set
Top 0.1%
15.0%
2
Scientific Reports
3102 papers in training set
Top 3%
12.6%
3
Current Biology
596 papers in training set
Top 2%
9.3%
4
iScience
1063 papers in training set
Top 0.4%
9.3%
5
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 17%
4.0%
50% of probability mass above
6
Communications Biology
886 papers in training set
Top 3%
2.8%
7
eLife
5422 papers in training set
Top 32%
2.7%
8
Nature Communications
4913 papers in training set
Top 46%
2.1%
9
Proceedings of the Royal Society B: Biological Sciences
341 papers in training set
Top 3%
1.9%
10
Chaos: An Interdisciplinary Journal of Nonlinear Science
16 papers in training set
Top 0.1%
1.9%
11
Nature Physics
39 papers in training set
Top 0.6%
1.8%
12
Nature
575 papers in training set
Top 10%
1.7%
13
Science Advances
1098 papers in training set
Top 16%
1.7%
14
Nature Neuroscience
216 papers in training set
Top 4%
1.7%
15
The Journal of Chemical Physics
49 papers in training set
Top 0.3%
1.4%
16
Nucleus
11 papers in training set
Top 0.1%
1.4%
17
Neuron
282 papers in training set
Top 6%
1.4%
18
Journal of the American Chemical Society
199 papers in training set
Top 4%
1.1%
19
Cell Reports
1338 papers in training set
Top 31%
0.8%
20
PLOS Computational Biology
1633 papers in training set
Top 23%
0.8%
21
Physical Review X
23 papers in training set
Top 0.6%
0.8%
22
ACS Nano
99 papers in training set
Top 4%
0.8%
23
Cells
232 papers in training set
Top 6%
0.8%
24
Cerebral Cortex
357 papers in training set
Top 2%
0.7%
25
Small
70 papers in training set
Top 1%
0.7%
26
Physical Review Research
46 papers in training set
Top 1.0%
0.7%
27
FEBS Letters
42 papers in training set
Top 0.4%
0.7%
28
Frontiers in Physics
20 papers in training set
Top 1%
0.7%
29
Biophysical Journal
545 papers in training set
Top 6%
0.7%
30
Entropy
20 papers in training set
Top 0.5%
0.7%