Back

Ceratopteris richardii U6 promoters and plants expressing Cas9 endonuclease as tools for efficient genome editing in a fern

Schulz, R.; Theissen, G.

2025-01-14 plant biology
10.1101/2025.01.12.632625 bioRxiv
Show abstract

Ferns and their allies (monilophytes) represent the second most species-rich group of land plants and are of considerable ecological importance. As a sister group of seed plants (including flowering plants) they are also of great evolutionary interest. Compared to flowering plants, however, much less is known about the developmental and molecular biology of ferns. Among the most important reasons have been the huge genome sizes of ferns and technical obstacles such as the lack of an efficient transformation system. In recent years the situation has improved considerably, however. For the fern model system Ceratopteris richardii a whole genome sequence has been published, and an efficient transformation system has been developed. To further facilitate studies on fern biology we aim at simplifying genome engineering of C. richardii with the CRISPR-Cas9 system. We report C. richardii plants that express Cas9 nuclease under control of the strong CaMV 35S promoter. For efficient expression of single guide RNA (sgRNA) by RNA polymerase III we identified C. richardii U6 promoters. These technical improvements may foster many fields of fern physiology, development and evolution.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Plants
39 papers in training set
Top 0.1%
17.1%
2
Scientific Reports
3102 papers in training set
Top 4%
12.0%
3
Frontiers in Plant Science
240 papers in training set
Top 0.7%
12.0%
4
PLOS ONE
4510 papers in training set
Top 20%
9.8%
50% of probability mass above
5
Plant Cell Reports
15 papers in training set
Top 0.1%
3.9%
6
Planta
15 papers in training set
Top 0.1%
3.2%
7
Plant Science
25 papers in training set
Top 0.3%
2.5%
8
The Plant Journal
197 papers in training set
Top 2%
2.5%
9
International Journal of Molecular Sciences
453 papers in training set
Top 5%
2.0%
10
Plant Methods
39 papers in training set
Top 0.3%
2.0%
11
Plant Direct
81 papers in training set
Top 1%
1.7%
12
PeerJ
261 papers in training set
Top 8%
1.7%
13
Frontiers in Genetics
197 papers in training set
Top 5%
1.7%
14
Genes
126 papers in training set
Top 1%
1.6%
15
Journal of Experimental Botany
195 papers in training set
Top 2%
1.3%
16
Gigabyte
60 papers in training set
Top 1%
0.9%
17
DNA Research
23 papers in training set
Top 0.4%
0.9%
18
Agronomy
18 papers in training set
Top 0.8%
0.8%
19
Open Biology
95 papers in training set
Top 2%
0.7%
20
F1000Research
79 papers in training set
Top 5%
0.7%
21
BMC Biotechnology
10 papers in training set
Top 0.1%
0.7%
22
ACS Synthetic Biology
256 papers in training set
Top 3%
0.7%
23
Plant And Cell Physiology
16 papers in training set
Top 0.5%
0.7%
24
New Phytologist
309 papers in training set
Top 5%
0.6%
25
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 11%
0.6%
26
Microorganisms
101 papers in training set
Top 3%
0.6%
27
Biology
43 papers in training set
Top 4%
0.6%