Chemical Proteomics Identifies Protein Ligands for Monoacylglycerol Lipids
Shanbhag, K.; Mhetre, A.; Saharan, O.; Devarajan, A.; Madhusudhan, M. S.; Chakrapani, H.; Kamat, S. S.
Show abstract
Signaling lipids are hormone-like small biomolecules that regulate many critical facets of physiology in mammals, including humans. Given their biomedical importance, the past few decades have seen a tremendous increase in our mechanistic understanding of the physiological processes regulated by a handful of such signaling lipids (e.g.: endocannabinoids, lysophospholipids, prostaglandins). However, a significant number of signaling lipid classes still remain poorly characterized, despite their direct associations to human pathophysiology and disease. Over the past decade, the advent of chemical proteomics technologies coupled with the development of multifunctional lipid probes has rapidly expanded our knowledge in terms of the protein ligands and biological pathways that the different signaling lipids interact with and modulate respectively. While the signaling pathways regulated by the endocannabinoid 2-arachidonoyl-glycerol in mammals are extensively characterized, the same cannot be said for the other members of the monoacylglycerol (MAG) family of signaling lipids. To understand this, here, we report the synthesis of a bifunctional MAG probe, containing a photoreactive group and a biorthogonal handle. Using established chemical proteomics approaches, we profile this bifunctional MAG probe in mouse brain and mammalian cell lysates, and leveraging probe competition experiments identify hitherto unknown protein ligands for MAG lipids. Finally, we biochemically validate the neuronal calcium sensor Hippocalcin as a putative MAG protein ligand, and show for the first time, that MAG may have a role to play in calcium sensing and downstream signaling in the mammalian brain.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
Similar papers in this journal
- Above-Filter Digestion Proteomics reveals drug targets and localizes ligand binding site 96%
- Automated Enrichment of Phosphotyrosine Peptides for High-Throughput Proteomics 95%
- Ovalbumin antigen-specific activation of T cell receptor closely resembles soluble antibody stimulation as revealed by BOOST phosphotyrosine proteomics 95%
Similar papers in this journal
- Discovery of Chemical Tools for Polysorbate-Degradative Enzyme Control in Biopharmaceutical Upstream Process via Multi-Omic Profiling of Host Cell Clones 96%
- Spatiotemporal proximity labeling tools to track GlcNAc sugar-modified functional protein hubs during cellular signaling 95%
- Photoredox-catalyzed decarboxylative C-terminal differentiation for bulk and single molecule proteomics 95%
Similar papers in this journal
- Design and Characterisation of Photoactivatable and Lysine Reactive o-Nitrobenzyl Alcohol-Based Crosslinkers 96%
- Protein Quaternary Structures in Solution are a Mixture of Multiple forms 94%
- Organelle-specific photoactivation and dual-isotope labeling strategy reveals phosphatidylethanolamine metabolic flux 94%
Similar papers in this journal
- The Holdup Multiplex, an assay for high-throughput measurement of protein-ligand affinity constants using a mass-spectrometry readout 96%
- An uncommon phosphorylation mode regulates the activity and protein-interactions of N-acetylglucosamine kinase 95%
- Profiling proteins involved in peroxynitrite homeostasis using ROS/RNS conditional proteomics 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.