Back

Development, External Validation, and Biomolecular Corroboration of Interoperable Models for Identifying Critically Ill Children at Risk of Neurologic Morbidity

Horvat, C. M.; Barda, A. J.; Perez Claudio, E.; Au, A. K.; Bauman, A.; Li, Q.; Li, R.; Munjal, N.; Wainwright, M.; Boonchalermvichien, T.; Hochheiser, H.; Clark, R. S. B.

2024-09-18 health informatics
10.1101/2024.09.17.24313649 medRxiv
Show abstract

ImportanceDeclining mortality in the field of pediatric critical care medicine has shifted practicing clinicians attention to preserving patients neurodevelopmental potential as a main objective. Earlier identification of critically ill children at risk for incurring neurologic morbidity would facilitate heightened surveillance that could lead to timelier clinical detection, earlier interventions, and preserved neurodevelopmental trajectory. ObjectiveDevelop machine-learning models for identifying acquired neurologic morbidity while hospitalized with critical illness and assess correlation with contemporary serum-based, brain injury-derived biomarkers. DesignRetrospective cohort study. SettingTwo large, quaternary childrens hospitals. ExposuresCritical illness. Main Outcomes and MeasuresThe outcome was neurologic morbidity, defined according to a computable, composite definition at the development site or an order for neurocritical care consultation at the validation site. Models were developed using varying time windows for temporal feature engineering and varying censored time horizons prior to identified neurologic morbidity. Optimal models were selected based on F1 scores, cohort sizes, calibration, and data availability for eventual deployment. A generalizable created at the development site was assessed at an external validation site and optimized with spline recalibration. Correlation was assessed between development site model predictions and measurements of brain biomarkers from a convenience cohort. ResultsAfter exclusions there were 14,222-25,171 encounters from 2010-2022 in the development site cohorts and 6,280-6,373 from 2018-2021 in the validation site cohort. At the development site, an extreme gradient boosted model (XGBoost) with a 12-hour time horizon and 48-hour feature engineering window had an F1-score of 0.54, area under the receiver operating characteristics curve (AUROC) of 0.82, and a number needed to alert (NNA) of 2. A generalizable XGBoost model with a 24-hour time horizon and 48-hour feature engineering window demonstrated an F1-score of 0.37, AUROC of 0.81, AUPRC of 0.51, and NNA of 4 at the validation site. After recalibration at the validation site, the Brier score was 0.04. Serum levels of the brain injury biomarker glial fibrillary acidic protein measurements significantly correlated with model output (rs=0.34; P=0.007). Conclusions and RelevanceWe demonstrate a well-performing ensemble of models for predicting neurologic morbidity in children with biomolecular corroboration. Prospective assessment and refinement of biomarker-coupled risk models in pediatric critical illness is warranted. Key PointsQuestion Can interoperable models for predicting neurological deterioration in critically ill children be developed, correlated with serum-based brain-derived biomarkers, and validated at an external site? Findings A development site model demonstrated an area under the receiver operating characteristics curve (AUROC) of 0.82 and a number needed to alert (NNA) of 2. Predictions correlated with levels of glial fibrillary acidic protein in a subset of children. A generalizable model demonstrated an AUROC of 0.81 and NNA of 4 at the validation site. Meaning Well performing prediction models coupled with brain biomarkers may help to identify critically ill children at risk for acquired neurological morbidity.

Matching journals

The top 10 journals account for 50% of the predicted probability mass.

1
Journal of the American Medical Informatics Association
61 papers in training set
Top 0.3%
8.5%
2
BMJ Open
554 papers in training set
Top 3%
6.4%
3
Annals of Neurology
57 papers in training set
Top 0.2%
6.4%
4
JAMA Pediatrics
10 papers in training set
Top 0.1%
4.9%
5
PLOS Digital Health
91 papers in training set
Top 0.5%
4.9%
6
JAMA Network Open
127 papers in training set
Top 0.5%
4.9%
7
BMJ Health & Care Informatics
13 papers in training set
Top 0.1%
4.3%
8
PLOS ONE
4510 papers in training set
Top 38%
3.7%
9
Scientific Reports
3102 papers in training set
Top 36%
3.6%
10
Journal of Medical Internet Research
85 papers in training set
Top 1%
3.6%
50% of probability mass above
11
International Journal of Medical Informatics
25 papers in training set
Top 0.4%
3.6%
12
Critical Care Explorations
15 papers in training set
Top 0.1%
3.6%
13
eClinicalMedicine
55 papers in training set
Top 0.1%
3.1%
14
BMC Medical Research Methodology
43 papers in training set
Top 0.4%
2.1%
15
BMJ Paediatrics Open
21 papers in training set
Top 0.4%
1.9%
16
Biology Methods and Protocols
53 papers in training set
Top 0.9%
1.7%
17
The Journal of Pediatrics
15 papers in training set
Top 0.4%
1.7%
18
BMC Medicine
163 papers in training set
Top 4%
1.5%
19
BMJ
49 papers in training set
Top 0.7%
1.5%
20
JMIR Medical Informatics
17 papers in training set
Top 0.9%
1.3%
21
CMAJ Open
12 papers in training set
Top 0.1%
1.2%
22
BMC Medical Informatics and Decision Making
39 papers in training set
Top 2%
1.2%
23
The Lancet Digital Health
25 papers in training set
Top 1.0%
0.8%
24
Frontiers in Pediatrics
29 papers in training set
Top 0.9%
0.7%
25
JMIR Public Health and Surveillance
45 papers in training set
Top 4%
0.7%
26
PLOS Global Public Health
293 papers in training set
Top 6%
0.7%
27
Annals of Internal Medicine
27 papers in training set
Top 0.9%
0.7%
28
Emergency Medicine Journal
20 papers in training set
Top 0.6%
0.7%
29
Medicine
30 papers in training set
Top 2%
0.7%
30
BMJ Open Quality
15 papers in training set
Top 0.9%
0.7%