Back

Evolutionary mismatch between nuclear and mitochondrial genomes does not promote reversion mutations in mtDNA.

Franco, M.; Popadin, K.; Woods, D. C.; Khrapko, K.

2024-08-23 bioinformatics
10.1101/2024.08.21.609033 bioRxiv
Show abstract

Serrano et al. (Serrano et al., 2024) use a high-fidelity somatic mtDNA mutation analysis in conplastic mice in which mtDNA was replaced with exogenous mtDNA of different mouse strains. Serrano reported apparent abundant somatic reversion mutations in the exogenous mtDNA that seemed to restore the original mito-nuclear match. If real, such a phenomenon would have important implications for health and genetics. In todays highly mixed human population, the pairing of potentially mismatched nuclear and mitochondrial genomes is widespread, so the proposed reversion mutagenesis should be commonplace. We demonstrate, however, that these reversion mutations are not real but originate from cross-contamination between samples and from NUMTs, the mtDNA pseudogenes located in the nuclear genome.

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Mitochondrion
11 papers in training set
Top 0.1%
38.7%
2
eLife
5422 papers in training set
Top 11%
7.0%
3
Molecular Biology and Evolution
488 papers in training set
Top 0.7%
6.5%
50% of probability mass above
4
Genome Biology and Evolution
280 papers in training set
Top 0.3%
4.4%
5
PLOS Genetics
756 papers in training set
Top 6%
2.7%
6
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 26%
2.4%
7
Nature Communications
4913 papers in training set
Top 48%
1.9%
8
Frontiers in Genetics
197 papers in training set
Top 4%
1.8%
9
Genome Research
409 papers in training set
Top 2%
1.7%
10
iScience
1063 papers in training set
Top 17%
1.5%
11
Science Advances
1098 papers in training set
Top 20%
1.5%
12
Scientific Reports
3102 papers in training set
Top 61%
1.5%
13
Nucleic Acids Research
1128 papers in training set
Top 12%
1.4%
14
PLOS ONE
4510 papers in training set
Top 60%
1.3%
15
Genes
126 papers in training set
Top 2%
1.0%
16
European Journal of Human Genetics
49 papers in training set
Top 0.9%
1.0%
17
BMC Biology
248 papers in training set
Top 3%
0.9%
18
International Journal of Molecular Sciences
453 papers in training set
Top 12%
0.9%
19
Genetics
225 papers in training set
Top 3%
0.9%
20
PLOS Biology
408 papers in training set
Top 16%
0.9%
21
Frontiers in Molecular Biosciences
100 papers in training set
Top 4%
0.8%
22
GENETICS
189 papers in training set
Top 1%
0.8%
23
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 9%
0.8%
24
Disease Models & Mechanisms
119 papers in training set
Top 3%
0.8%
25
Biology Open
130 papers in training set
Top 3%
0.8%
26
Genome Biology
555 papers in training set
Top 7%
0.8%
27
Cancers
200 papers in training set
Top 5%
0.8%
28
Genes, Brain and Behavior
29 papers in training set
Top 0.4%
0.7%
29
Human Molecular Genetics
130 papers in training set
Top 4%
0.7%
30
Peer Community Journal
254 papers in training set
Top 4%
0.7%