Improving positively tuned voltage indicators for brightness and kinetics
Lee, S.; Zhang, G.; Gomez, L. C.; Hao, Y. A.; Jiang, D.; Roth, R. H.; Testa-Silva, G.; Ding, J.; Clandinin, T. R.; Feldman, D.; Ji, N.; Lin, M. Z.
Show abstract
The recent positively tuned ASAP4-family voltage indicators feature superior photostability compared to the negatively tuned ASAP3, but signal-to-noise ratios (SNRs) for spike detection were not significantly different. To improve spike detection by positively tuned ASAP indicators, we performed multiple rounds of structure-guided saturation mutagenesis of an ASAP4 template while screening directly for faster responses. Our resulting variants, ASAP6.1 and ASAP6b, demonstrated sufficient dynamic range and kinetics, and reported action potentials in vivo by one-photon and two-photon microscopy with high SNR and temporal resolution. Previously, we developed positively tuned ASAP4-subfamily GEVIs with high photostability1. While these had higher {Delta}F/F0 from -70 mV to +30 mV than the negatively tuned ASAP32 or ASAP5, their F-V curves were spread out over a larger voltage range. In addition, ASAP4b and ASAP4e onset kinetics are biexponential with only a minority component of the response exhibiting a time constant of < 10 ms. Both limitations could be due to steric or electrostatic interactions that cause resistance to upward S4 movement in ASAP4 variants. Thus, we set out to engineer positively tuned GEVIs with faster activation kinetics over ASAP4b and ASAP4e, while maintaining or improving steady-state responsivity.
Matching journals
The top 2 journals account for 50% of the predicted probability mass.
Similar papers in this journal
Similar papers in this journal
- Pixel-wise programmability enables dynamic high-SNR cameras for high-speed microscopy 96%
- Detecting rapid pan-cortical voltage dynamics in vivo with a brighter and faster voltage indicator 95%
- Diesel2p mesoscope with dual independent scan engines for flexible capture of dynamics in distributed neural circuitry 95%
Similar papers in this journal
- A spectral demixing method for high-precision multi-color localization microscopy 93%
- 3D-Aligner: An advanced computational tool designed to correct image distortion in expansion microscopy for precise 3D reconstitution and quantitative analysis 93%
- High-speed imaging of light-induced photoreceptor microsaccades in compound eyes 93%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.