Back
Incubation period, serial interval, generation time and reproduction number of mpox clade I
Marziano, V.; Guzzetta, G.; Longini, I.; Merler, S.
2024-05-10
epidemiology
10.1101/2024.05.10.24307157
medRxiv
Show abstract
We estimate that the generation time of mpox clade I is distinctly longer than clade IIb and may depend on the transmission route (mean 17.5 days in households vs. 11.4 in hospitals). We estimate a mean reproduction number of 1.22-1.33 in the Democratic Republic of the Congo between August 2023-March 2024.
Matching journals
●Non-profit
◐University press
○Commercial
The top 10 journals account for 50% of the predicted probability mass.
1
Scientific Reports
○
3612 papers in training set
Top 2%
12.7%
Similar papers in this journal
- Identifying likely transmission pairs with pathogen sequence data using Kolmogorov Forward Equations; an application to M.bovis in cattle and badgers 93%
- Evidence-based pandemic preparedness: an infrastructure for population-scale genome-based based testing for COVID-19 92%
- Estimation of R0 for the spread of SARS-CoV-2 in Germany from Excess Mortality 92%
2
Epidemiology and Infection
◐
89 papers in training set
Top 0.1%
7.9%
Similar papers in this journal
- The spatio-temporal epidemic dynamics of COVID-19 outbreak in Africa 91%
- Epidemiological Profile and Transmission Dynamics of COVID-19 in the Philippines 90%
- Immunity acquired by a minority active fraction of the population could explain COVID-19 spread in Greater Buenos Aires (June-November 2020) 89%
3
Nature Communications
○
5641 papers in training set
Top 23%
6.8%
Similar papers in this journal
- Using multiple sampling strategies to estimate SARS-CoV-2 epidemiological parameters from genomic sequencing data 93%
- Identifying regions for enhanced control of gambiense sleeping sickness in the Democratic Republic of Congo 93%
- Infectivity, susceptibility, and risk factors associated with SARS-CoV-2 transmission under intensive contact tracing in Hunan, China 92%
4
BMJ Global Health
●
113 papers in training set
Top 0.7%
5.2%
Similar papers in this journal
- Early estimates of COVID-19 infections in small, medium and large population clusters 92%
- Social and racial inequalities in COVID-19 risk of hospitalisation and death across São Paulo state, Brazil 91%
- Modelling the effect of infection prevention and control measures on rate of Mycobacterium tuberculosis transmission to clinic attendees in primary health clinics in South Africa 91%
5
Eurosurveillance
●
83 papers in training set
Top 0.2%
4.1%
Similar papers in this journal
50% of probability mass above
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.