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Automatic parameter estimation and detection of ringed seal knocking vocalizations

Solana, A.; Young, M.; Nadeu, C.; Kunnasranta, M.; Houegnigan, L.

2026-01-29 ecology
10.1101/2024.05.06.592639 bioRxiv
Show abstract

Passive acoustic monitoring is a valuable tool for studying elusive marine mammals, but analyzing large datasets is typically labor-intensive and costly. In this study, we piloted an automatic approach for sound analysis on extensive datasets of acoustic underwater recordings from freshwater Lake Saimaa over a total of 12 months. Our focus was on "knocking" vocalizations, the most commonly found call type of the endangered Saimaa ringed seal (Pusa saimensis). The annotated datasets of knock sounds (n = 13,179) were used to train and test binary classification systems to detect this sound type. In addition, the fundamental frequencies of the vocalizations were automatically estimated by an ensemble of methods and corroborated by recent literature. The best classifier was a spectrogram-based convolutional neural network that achieved a minimum F1-score of 97.76% on unseen samples from each dataset, demonstrating its ability to detect knockings amongst noise and other events. Moreover, the estimated fundamental frequencies are comparable to the ones manually computed for the same datasets. These automated approaches can significantly reduce labor and costs associated with manual analysis, making long-term species monitoring more feasible and efficient.

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