Back

Insulated piggyBac and FRT vectors for engineering transgenic homozygous and heterozygous eHAP cells

Minard, A. Y.; Winistorfer, S.; Piper, R. C.

2024-04-23 cell biology
10.1101/2024.04.19.590353 bioRxiv
Show abstract

Transgene expression in eHAP cells, a haploid cell line popularly used to generate gene knockouts, is difficult owing to its low transfection efficiency and propensity for silencing integrated transgenes. To simplify transgene expression, we engineered insulated integrating plasmids that sustain high levels of transgene expression in eHAP cells, and that can be used in other cell lines. These vectors are compatible with FLP-FRT and piggyBac integration, they flank a gene-of interest bilaterally with tandem cHS4 core insulators, and co-express nuclear-localized blue fluorescent protein for identification of high expressing cells. We further demonstrate that transgenic haploid eHAP cells can be fused to form transgenic heterozygous diploid cells. This method creates diploid cells carrying the transgenic material of the haploid progenitors and could also be used to create heterozygous cells of defined genotypes. These tools expand the repertoire of experiments that can be performed in eHAP cells and other cultured cells.

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
Cell Reports Methods
141 papers in training set
Top 0.1%
10.4%
2
Nature Communications
4913 papers in training set
Top 22%
8.4%
3
ACS Synthetic Biology
256 papers in training set
Top 0.5%
8.4%
4
PLOS ONE
4510 papers in training set
Top 28%
6.3%
5
Scientific Reports
3102 papers in training set
Top 24%
4.9%
6
Nucleic Acids Research
1128 papers in training set
Top 4%
4.3%
7
Cell Structure and Function
11 papers in training set
Top 0.1%
4.3%
8
Journal of Cell Science
353 papers in training set
Top 0.5%
3.6%
50% of probability mass above
9
eLife
5422 papers in training set
Top 25%
3.6%
10
Cell Reports
1338 papers in training set
Top 22%
1.9%
11
Human Molecular Genetics
130 papers in training set
Top 1%
1.9%
12
PLOS Genetics
756 papers in training set
Top 8%
1.9%
13
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 32%
1.7%
14
Molecular Biology of the Cell
272 papers in training set
Top 1%
1.7%
15
iScience
1063 papers in training set
Top 15%
1.7%
16
Development
440 papers in training set
Top 2%
1.7%
17
The CRISPR Journal
33 papers in training set
Top 0.1%
1.7%
18
G3 Genes|Genomes|Genetics
351 papers in training set
Top 2%
1.5%
19
Cell
370 papers in training set
Top 13%
1.3%
20
Journal of Biological Chemistry
641 papers in training set
Top 2%
1.3%
21
Current Biology
596 papers in training set
Top 11%
1.3%
22
Genetics
225 papers in training set
Top 3%
1.2%
23
Science
429 papers in training set
Top 16%
1.2%
24
Journal of Cell Biology
333 papers in training set
Top 4%
0.9%
25
Biophysical Journal
545 papers in training set
Top 4%
0.9%
26
Science Advances
1098 papers in training set
Top 26%
0.9%
27
Journal of Molecular Cell Biology
21 papers in training set
Top 0.6%
0.8%
28
Life Science Alliance
263 papers in training set
Top 2%
0.7%
29
Biology Open
130 papers in training set
Top 3%
0.7%
30
Acta Biochimica et Biophysica Sinica
19 papers in training set
Top 0.9%
0.7%