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fMROI: a simple and adaptable toolbox for easy region-of-interest creation

Peres, A. S. C.; Valerio, D.; Vaz, I. S.; Mahdiani, M.; Walbrin, J.; Almeida, J.

2024-03-31 neuroscience
10.1101/2024.03.29.587330 bioRxiv
Show abstract

This study introduces fMROI, an open-source software designed for creating regions-of-interest (ROIs) and visualizing magnetic resonance imaging data. fMROI offers a user-friendly graphical interface that simplifies the creation of complex ROIs. It is compatible with various operating systems and enables the integration of user-specified algorithms. Comparative analysis against popular neuroimaging software demonstrates the feasibility, applicability, and ease of use of fMROI. Notably, fMROIs interactive graphical interface with a real-time viewer allows users to identify inconsistencies and design more accurate ROIs, saving significant time by avoiding errors before storing ROIs as NIfTI files. Additionally, fMROI supports automation through command-line accessibility, making it ideal for large-scale analyses. As an open-source platform, fMROI provides a valuable resource for researchers in the neuroimaging community, facilitating efficient ROI creation and streamlining neuroimage analysis.

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