Back

The disruption of CtBP regulates DUX-dependent and -independent genetic program for the 2-cell-like state in murine embryonic stem cells

Sugiyama, K.; Yoshioka, K.; Hayakawa, N.; Marutani, M.; Masuda, R.; Abadi, S. A.; Seki, Y.

2024-01-13 cell biology
10.1101/2024.01.12.575352 bioRxiv
Show abstract

After fertilization, maternally deposited mRNA is cleared, and de novo mRNA is transcribed from the zygotic genome through zygotic genome activation (ZGA), a process known as maternal-to-zygotic transition (MZT) occurring in the mouse at 2-cell (2C) stage. 2C-like cells (2CLCs) marked by MERVL expression are transcriptionally similar to 2C embryos spontaneously emerge from mouse embryonic stem cells (mESCs). Although the emergence of 2CLCs completely depends on DUX function, a recent knockout study clearly showed that DUX is dispensable for mouse embryos, suggesting that DUX-independent molecular pathways are not recapitulated in 2CLCs. We present here that the disruption of C-terminal binding protein 1/2 (Ctbp1/2) activates DUX-dependent and -independent molecular pathway associated with the development of early mouse embryos mediated by the upregulation of Preferentially expressed antigen of melanoma family-like 7 (PRAMEL7). Furthermore, the abnormality of the gene expression profile caused by Dux KO is partially rescued by the overexpression of PRAMEL7 in mESCs. Our study provides new insights into the DUX-independent molecular pathway for the activation of early embryonic genes in mESCs.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
Journal of Molecular Cell Biology
21 papers in training set
Top 0.1%
12.2%
2
Cell Discovery
54 papers in training set
Top 0.5%
8.3%
3
Protein & Cell
25 papers in training set
Top 0.3%
6.3%
4
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 0.7%
6.3%
5
eLife
5422 papers in training set
Top 14%
6.3%
6
Journal of Genetics and Genomics
36 papers in training set
Top 0.1%
6.2%
7
PLOS ONE
4510 papers in training set
Top 32%
4.8%
50% of probability mass above
8
PLOS Genetics
756 papers in training set
Top 5%
3.5%
9
Genomics, Proteomics & Bioinformatics
171 papers in training set
Top 2%
3.0%
10
Cell Proliferation
12 papers in training set
Top 0.1%
2.0%
11
iScience
1063 papers in training set
Top 12%
1.9%
12
Scientific Reports
3102 papers in training set
Top 54%
1.9%
13
Cell Death Discovery
51 papers in training set
Top 0.5%
1.8%
14
Cells
232 papers in training set
Top 3%
1.7%
15
Biochemical and Biophysical Research Communications
78 papers in training set
Top 0.6%
1.7%
16
Acta Biochimica et Biophysica Sinica
19 papers in training set
Top 0.3%
1.7%
17
International Journal of Molecular Sciences
453 papers in training set
Top 8%
1.7%
18
The FASEB Journal
175 papers in training set
Top 1%
1.6%
19
Genes to Cells
23 papers in training set
Top 0.1%
1.5%
20
Journal of Cellular Physiology
21 papers in training set
Top 0.3%
1.3%
21
Neuroscience Bulletin
11 papers in training set
Top 0.4%
1.3%
22
Developmental Biology
134 papers in training set
Top 2%
0.9%
23
Genes
126 papers in training set
Top 2%
0.9%
24
Cell Research
49 papers in training set
Top 2%
0.8%
25
Journal of Biological Chemistry
641 papers in training set
Top 4%
0.8%
26
Molecular and Cellular Biology
40 papers in training set
Top 0.3%
0.8%
27
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
25 papers in training set
Top 0.8%
0.8%
28
Cell Structure and Function
11 papers in training set
Top 0.1%
0.8%
29
PLOS Biology
408 papers in training set
Top 18%
0.8%
30
Journal of Cell Science
353 papers in training set
Top 3%
0.7%