Back

Biosynthesis of the proteins containing neurotoxin β-N-methylamino-L-alanine in marine diatoms

Zheng, X.; Li, A.; Qiu, J.; Yan, G.; Zhao, P.; Li, M.; Meng, F.

2023-12-23 biochemistry
10.1101/2023.12.21.572844 bioRxiv
Show abstract

Neurotoxin {beta}-N-methylamino-L-alanine (BMAA) has been deemed a pathogenic factor for human neurodegenerative diseases. It is an important issue to disclose the biosynthesis mechanism of BMAA in marine diatoms. In the present study, the iron (Fe) limitation (1/3 x Fe) was found to suppress the growth of diatoms but stimulate the production of BMAA-containing proteins, maximum 7.7 fold in Thalassiosira minima. Transcriptome analysis showed that energy metabolism, protein biosynthesis and carbon fixation functions were mainly affected by the Fe limitation in the diatom. Analysis of subcellular distribution of BMAA showed that BMAA-containing proteins were mainly detected in the endoplasmic reticulum and the Golgi apparatus. Combination results of the responses of the diatom to Fe deficiency and co-culture with cyanobacteria in our previous study, we speculate that cysteine embedded in peptide chains and methylamine produced by the diatom itself are possibly catalyzed by the cysteine synthase (cysK) to form the BMAA structure in situ. Spiked methylamine in culture media significantly stimulated the production of BMAA, and BMAA amounts were correlated with the expression of cysK gene in different diatoms. The reduced ubiquitination-mediated proteolysis and vesicle trafficking precision through the COPII system would aggravate the accumulation of BMAA-containing proteins in the diatom. Significance StatementWith the detection of neurotoxin BMAA in diverse marine diatoms, the pathogenic risk of BMAA has been further concerned to human neurodegenerative diseases such as Alzheimers disease. Interestingly, BMAA-containing proteins are the dominant forms of this neurotoxin in diatoms. It is a keystone issue to disclose the biosynthesis mechanism of BMAA in marine diatoms. We found Fe-limitation could stimulate the production of BMAA-containing proteins in diatoms and explored its biosynthesis using transcriptomics in this study. Results suggested that cysteine embedded in peptides and methylamine in cytoplasm were catalyzed by the cysteine synthase (cysK) to form BMAA. This study hints that the biosynthesis of BMAA would be improved by the worldwide prevalence of iron deficiency in the coastal waters.

Matching journals

The top 15 journals account for 50% of the predicted probability mass.

1
Metallomics
11 papers in training set
Top 0.1%
8.7%
2
Environmental Pollution
35 papers in training set
Top 0.4%
7.1%
3
PLOS ONE
4510 papers in training set
Top 30%
5.0%
4
Biochemistry
130 papers in training set
Top 0.2%
5.0%
5
Journal of Hazardous Materials
19 papers in training set
Top 0.2%
3.7%
6
Science of The Total Environment
179 papers in training set
Top 2%
3.7%
7
Scientific Reports
3102 papers in training set
Top 33%
3.7%
8
Journal of Structural Biology
58 papers in training set
Top 0.5%
2.2%
9
mSystems
361 papers in training set
Top 4%
2.0%
10
Journal of Proteome Research
215 papers in training set
Top 1%
2.0%
11
International Journal of Molecular Sciences
453 papers in training set
Top 7%
1.8%
12
Microbiology Spectrum
435 papers in training set
Top 2%
1.7%
13
PeerJ
261 papers in training set
Top 8%
1.5%
14
Environmental Research
46 papers in training set
Top 0.9%
1.5%
15
Water Research
74 papers in training set
Top 1%
1.4%
50% of probability mass above
16
Communications Biology
886 papers in training set
Top 13%
1.3%
17
ACS Omega
90 papers in training set
Top 3%
1.1%
18
ACS Chemical Neuroscience
60 papers in training set
Top 2%
1.1%
19
Metabolomics
11 papers in training set
Top 0.3%
1.1%
20
International Journal of Biological Macromolecules
65 papers in training set
Top 3%
1.0%
21
Applied and Environmental Microbiology
301 papers in training set
Top 3%
0.9%
22
Molecular Omics
21 papers in training set
Top 0.2%
0.9%
23
Biochemical and Biophysical Research Communications
78 papers in training set
Top 1%
0.9%
24
Biosensors and Bioelectronics
52 papers in training set
Top 1%
0.8%
25
eLife
5422 papers in training set
Top 54%
0.8%
26
iScience
1063 papers in training set
Top 28%
0.8%
27
Mitochondrion
11 papers in training set
Top 0.1%
0.8%
28
RSC Advances
18 papers in training set
Top 1%
0.8%
29
Frontiers in Plant Science
240 papers in training set
Top 5%
0.8%
30
Environmental Microbiology
119 papers in training set
Top 3%
0.7%