A functional perspective on the conditional covariance comparison problem in dementia analysis
Guan, C.; Gangopadhyay, A.
Show abstract
Although there are many methods available in the literature to compare the covariance structures of two populations, few are suitable for clinical application due to the inability to account for covariate(s) that affect the dependence structure of the variables being investigated. A common method is to adjust the effect of the covariates via a linear model and work with the resulting residuals. However, removing the effects of the covariates could potentially eliminate valuable information from the analysis. We propose a functional nonparametric covariance matrix estimator to account for any given value in the covariate(s), which allows a comparison of the functional covariance structures of the multivariate data. This comparison is facilitated via a test statistic involving the first eigenvalue of the combined form of covariance matrices of the two groups. Three different approaches, namely, the parametric Tracy-Widom, the semi-parametric Forkmans test, and the nonparametric Permutation method, are used to compute the approximate p-values of the test statistic. We have conducted extensive simulation studies to determine the type I error and power of the proposed hypothesis testing methods and developed practical recommendations for implementing this novel approach. Finally, we apply our methods to the Alzheimers Disease Neuroimaging Initiative (ADNI) study to compare cerebrospinal fluid (CSF) biomarkers between dementia and non-dementia cohorts, which offers a fascinating insight into the differences between covariance structures of biomarkers amyloid {beta}(1-42) (A{beta}42), total tau (tau), and phosphorylated tau (ptau) for given values of age, sex, and years of education.
Matching journals
The top 7 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Theoretical properties of nearest-neighbor distance distributions and novel metrics for high dimensional bioinformatics data 94%
- Testing gene-environment interactions for rare and/or common variants in sequencing association studies 93%
- Time-to-event estimation of birth year prevalence trends: a method to enable investigating the etiology of childhood disorders including autism 93%
Similar papers in this journal
- A robust and fast two-sample test of equal correlations with an application to differential co-expression 95%
- Using generalized additive models to analyze biomedical non-linear longitudinal data 94%
- Using a supervised principal components analysis for variable selection in high-dimensional datasets reduces false discovery rates 93%
Similar papers in this journal
- DOT: Gene-set analysis by combining decorrelated association statistics 94%
- Model Checking via Testing for Direct Effects in Mendelian Randomization and Transcriptome-wide Association Studies 94%
- RCFGL: Rapid Condition adaptive Fused Graphical Lasso and application to modeling brain region co-expression networks 93%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.