Human mobility impacts the transmission of common respiratory viruses: A modeling study of the Seattle metropolitan area
Perofsky, A. C.; Hansen, C.; Burstein, R.; Boyle, S.; Prentice, R.; Marshall, C.; Reinhart, D.; Capodanno, B.; Truong, M.; Schwabe-Fry, K.; Kuchta, K.; Pfau, B.; Acker, Z.; Lee, J.; Sibley, T. R.; McDermot, E.; Rodriguez-Salas, L.; Stone, J.; Gamboa, L.; Han, P. D.; Adler, A.; Waghmare, A.; Jackson, M. L.; Famulare, M.; Shendure, J.; Bedford, T.; Chu, H. Y.; Englund, J. A.; Starita, L. M.; Viboud, C.
Show abstract
Many studies have used mobile device location data to model SARS-CoV-2 dynamics, yet relationships between mobility behavior and endemic respiratory pathogens are less understood. We studied the impacts of human mobility on the transmission of SARS-CoV-2 and 16 endemic viruses in Seattle over a 4-year period, 2018-2022. Before 2020, school-related foot traffic and large-scale population movements preceded seasonal outbreaks of endemic viruses. Pathogen circulation dropped substantially after the initiation of stay-at-home orders in March 2020. During this period, mobility was a positive, leading indicator of transmission of all endemic viruses and lagged SARS-CoV-2 activity. Mobility was briefly predictive of SARS-CoV-2 transmission when restrictions relaxed in summer 2020 but associations weakened in subsequent waves. The rebound of endemic viruses was heterogeneously timed but exhibited stronger relationships with mobility than SARS-CoV-2. Mobility is most predictive of respiratory virus transmission during periods of dramatic behavioral change, and, to a lesser extent, at the beginning of epidemic waves. Teaser: Human mobility patterns predict the transmission dynamics of common respiratory viruses in pre- and post-pandemic years.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Heterogeneity in transmissibility and shedding SARS-CoV-2 via droplets and aerosols 96%
- Repeated introductions and intensive community transmission fueled a mumps virus outbreak in Washington State 94%
- SARS-CoV-2 shedding dynamics across the respiratory tract, sex and disease severity for adult and pediatric COVID-19 94%
Similar papers in this journal
- Measures of population immunity can predict the dominant clade of influenza A (H3N2) and reveal age-associated differences in susceptibility and specificity 93%
- SARS-CoV-2 infection-induced immunity and the duration of viral shedding: results from a Nicaraguan household cohort study 93%
- The role of viral interference in shaping RSV epidemics following the 2009 H1N1 influenza pandemic 93%
Similar papers in this journal
- Persistence of SARS-CoV-2 immunity, Omicron’s footprints, and projections of epidemic resurgences in South African population cohorts 95%
- Epidemiological dynamics of enterovirus D68 in the US: implications for acute flaccid myelitis 94%
- Mutational dynamics and transmission properties of SARS-CoV-2 superspreading events in Austria 94%
Similar papers in this journal
- Using high-resolution contact networks to evaluate SARS-CoV-2 transmission and control in large-scale multi-day events 95%
- Mapping the emergence of SARS-CoV-2 Omicron variants on a university campus 94%
- Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.