Co-transcriptional translation amplifies mRNA noise in Escherichia coli
Yang, S.; Park, S.; Son, J. B.; Kim, S.; Yi, S.; Bu, G.; Lee, N. K.
Show abstract
The variability in mRNA expression among isogenic cells exposed to identical environments is inherent. This variability originates from the inherent stochasticity of all processes underlying transcription. Although transcription and translation can occur simultaneously on the same mRNA molecule in bacteria, it is not well understood whether and how co-transcriptional translation contributes to variability in mRNA expression. Here, we studied the contribution of co-transcriptional translation to mRNA noise in E. coli cells. Using a transcription system physically decoupled from translation, we investigated the effect of ribosome binding to mRNA transcripts on variability in mRNA expression. We found that the propagation of RNAP noise to the mRNA level was increased by ribosome binding, leading to larger variations in the mRNA levels. We further demonstrated that ribosome binding increased the transcription initiation rate, resulting in the promoter becoming susceptible to RNAP noise. Co-transcriptional translation amplified transcriptional noise and modulated transcriptional bursting kinetics in bacterial cells.
Matching journals
The top 2 journals account for 50% of the predicted probability mass.
Similar papers in this journal
Similar papers in this journal
- Imaging translational control by Argonaute with single-molecule resolution in live cells 94%
- Cyclin CLB2 mRNA localization and protein synthesis link cell cycle progression to bud growth 94%
- Systematic analysis of low-affinity transcription factor binding site clusters in vitro and in vivo establishes their functional relevance 94%
Similar papers in this journal
- Allele-specific single-cell RNA sequencing reveals different architectures of intrinsic and extrinsic gene expression noises 95%
- Coordination of -1 Programmed Ribosomal Frameshifting by Transcript and Nascent Chain Features Revealed by Deep Mutational Scanning 94%
- Transcription feedback dynamics in the wake of cytoplasmic degradation shutdown 94%
Similar papers in this journal
- First responders shape a prompt and sharp NF-κB-mediated transcriptional response to TNF-α 94%
- Escherichia coli NusG links the lead ribosome with the transcription elongation complex 93%
- Core Fermentation (CoFe) granules focus coordinated glycolytic mRNAlocalization and translation to fuel glucose fermentation 93%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.