Back

Investigating a role for PUB17 and PUB16 in the self-incompatibility pathway in transgenic Arabidopsis thaliana.

Beronilla, P.; Goring, D.

2023-10-25 plant biology
10.1101/2023.10.24.563783 bioRxiv
Show abstract

In Brassicaceae self-incompatibility (SI), self-pollen rejection is initiated by the S-haplotype specific interactions between the pollen SCR/SP11 ligand and the stigma S Receptor kinase (SRK). In Brassica SI, a member of the Plant U-Box (PUB) E3 ubiquitin ligases, ARC1, is then activated by SRK in this stigma and cellular events downstream of this cause SI pollen rejection by inhibiting pollen hydration and pollen tube growth. During the transition to selfing, Arabidopsis thaliana lost the SI components, SCR, SRK, and ARC1. However, this trait can be reintroduced into A. thaliana by adding back functional copies of these genes from closely related SI species. Both SCR and SRK are required for this, though the degree of SI pollen rejection varies between accessions, and ARC1 is not always needed to produce a strong SI response. For A. thaliana C24, only transforming with A. lyrata SCR and SRK confers a strong SI trait, and so here we investigated if ARC1-related PUBs were involved in the SI pathway. Two close ARC1 paralogs, PUB17 and PUB16, were selected, and CRISPR/Cas9 technology was used to generate pub17 and pub16 mutations in the C24 accession. These mutants were then crossed into a transgenic A. thaliana SI-C24 line and their potential impact on SI pollen rejection was investigated. Overall, we did not observe any significant differences to implicate PUB17 and PUB16 functioning in the transgenic A. thaliana SI-C24 stigma to reject SI pollen.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
Frontiers in Plant Science
240 papers in training set
Top 0.2%
19.4%
2
Journal of Experimental Botany
195 papers in training set
Top 0.4%
10.1%
3
New Phytologist
309 papers in training set
Top 0.9%
6.8%
4
Plant Reproduction
12 papers in training set
Top 0.1%
6.4%
5
Scientific Reports
3102 papers in training set
Top 28%
4.3%
6
PLOS Genetics
756 papers in training set
Top 3%
4.3%
50% of probability mass above
7
PLOS ONE
4510 papers in training set
Top 38%
3.7%
8
The Plant Journal
197 papers in training set
Top 1%
3.6%
9
International Journal of Molecular Sciences
453 papers in training set
Top 5%
2.4%
10
BMC Plant Biology
47 papers in training set
Top 0.3%
1.9%
11
Plant Physiology
217 papers in training set
Top 2%
1.8%
12
Plants
39 papers in training set
Top 1%
1.7%
13
The Plant Genome
53 papers in training set
Top 0.4%
1.7%
14
Genetics
225 papers in training set
Top 2%
1.7%
15
Plant And Cell Physiology
16 papers in training set
Top 0.2%
1.7%
16
Frontiers in Genetics
197 papers in training set
Top 6%
1.5%
17
Plant Direct
81 papers in training set
Top 1%
1.5%
18
Plant and Cell Physiology
31 papers in training set
Top 0.2%
1.3%
19
Theoretical and Applied Genetics
46 papers in training set
Top 0.3%
1.3%
20
The Plant Cell
141 papers in training set
Top 2%
1.3%
21
Development
440 papers in training set
Top 2%
1.2%
22
eLife
5422 papers in training set
Top 49%
1.2%
23
Plant Biotechnology Journal
56 papers in training set
Top 0.9%
0.9%
24
Horticulture Research
43 papers in training set
Top 1%
0.9%
25
Planta
15 papers in training set
Top 0.3%
0.9%
26
G3 Genes|Genomes|Genetics
351 papers in training set
Top 2%
0.8%
27
Plant, Cell & Environment
78 papers in training set
Top 1%
0.7%
28
Plant Science
25 papers in training set
Top 1%
0.7%
29
Biology
43 papers in training set
Top 3%
0.6%
30
Nature Communications
4913 papers in training set
Top 65%
0.6%