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Streptococcus mutans inhibits the growth of Enterococcus via the non-ribosomal cyclic peptide mutanobactin
Willett, J.; Robertson, E. B.
2023-09-12
microbiology
10.1101/2023.09.12.557362
bioRxiv
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Withdrawal statementThis manuscript has been withdrawn due to concerns about missing raw data. This work should not be cited as reference for the project. If you have any questions, please contact the corresponding author.
Matching journals
●Non-profit
◐University press
○Commercial
The top 4 journals account for 50% of the predicted probability mass.
1
mSphere
●
302 papers in training set
Top 0.1%
18.4%
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2
mBio
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833 papers in training set
Top 0.8%
15.0%
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3
Journal of Bacteriology
●
212 papers in training set
Top 0.3%
12.6%
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- The phosphatase Bph and peptidyl-prolyl isomerase PrsA are required for gelatinase expression and activity in Enterococcus faecalis 97%
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- Spontaneous Mutants of Streptococcus sanguinis with Defects in the Glucose-PTS Show Enhanced Post-Exponential Phase Fitness 96%
4
Infection and Immunity
●
120 papers in training set
Top 0.3%
7.2%
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- c-di-AMP is essential for the virulence of Enterococcus faecalis 98%
- Enterococcus faecalis manganese exporter MntE alleviates manganese toxicity and is required for mouse gastrointestinal colonization 97%
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50% of probability mass above
5
Microbiology Spectrum
●
469 papers in training set
Top 2%
6.7%
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- C-di-AMP levels modulate Staphylococcus aureus cell wall thickness as well as virulence and contribute to antibiotic resistance and tolerance 96%
- Gallocin A, an atypical two-peptide bacteriocin with intramolecular disulfide bonds required for activity 95%
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"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.