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UBC13-mediated template switching promotes replication stress resistance in FBH1-deficient cells

Hawks, A. L.; Bergmann, A.; McCraw, T.; Mason, J. M.

2023-09-05 molecular biology
10.1101/2023.09.04.556280 bioRxiv
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Withdrawal StatementThe authors have withdrawn this manuscript because experiments completed with more sensitive detection methods have led to results inconsistent with the original data and conclusions of the original manuscript. Therefore, the authors do not wish this work to be cited as reference for the project. If you have any questions, please contact the corresponding author.

Matching journals

The top 9 journals account for 50% of the predicted probability mass.

1
Journal of Molecular Biology
○ 232 papers in training set
Top 0.1%
10.9%
Similar papers in this journal
2
Molecular and Cellular Biology
○ 47 papers in training set
Top 0.1%
8.8%
Similar papers in this journal
3
eLife
● 5828 papers in training set
Top 14%
7.8%
Similar papers in this journal
4
Cell Reports
○ 1498 papers in training set
Top 4%
6.7%
Similar papers in this journal
5
EMBO Reports
○ 263 papers in training set
Top 0.8%
4.3%
Similar papers in this journal
6
Nature Communications
○ 5641 papers in training set
Top 32%
4.0%
7
The EMBO Journal
○ 309 papers in training set
Top 1%
3.2%
8
Cells
○ 249 papers in training set
Top 1%
3.2%
9
iScience
○ 1154 papers in training set
Top 7%
3.2%
50% of probability mass above
10
Communications Biology
○ 993 papers in training set
Top 6%
3.1%
11
Nucleic Acids Research
◐ 1281 papers in training set
Top 7%
2.4%
12
Scientific Reports
○ 3612 papers in training set
Top 41%
2.4%
13
Journal of Biological Chemistry
○ 690 papers in training set
Top 4%
2.4%
14
PLOS ONE
● 5266 papers in training set
Top 41%
2.4%
15
G3: Genes, Genomes, Genetics
◐ 252 papers in training set
Top 2%
2.4%
16
Journal of Cell Science
● 393 papers in training set
Top 2%
2.1%
17
International Journal of Molecular Sciences
○ 494 papers in training set
Top 8%
1.7%
18
PLOS Genetics
● 862 papers in training set
Top 8%
1.3%
19
mBio
● 833 papers in training set
Top 9%
1.3%
20
Genome Biology and Evolution
◐ 338 papers in training set
Top 2%
1.3%
21
Molecular Biology of the Cell
● 311 papers in training set
Top 3%
1.1%
22
DNA Repair
○ 19 papers in training set
Top 0.1%
1.1%
23
The FEBS Journal
○ 93 papers in training set
Top 1%
1.1%
24
PLOS Biology
● 486 papers in training set
Top 9%
1.1%
25
GENETICS
◐ 483 papers in training set
Top 4%
1.0%
26
Life Science Alliance
● 285 papers in training set
Top 7%
1.0%
27
BMC Genomics
○ 406 papers in training set
Top 8%
0.8%
28
RNA Biology
○ 78 papers in training set
Top 1%
0.8%
29
Cell Cycle
○ 17 papers in training set
Top 0.4%
0.8%
30
Proceedings of the National Academy of Sciences
● 2444 papers in training set
Top 41%
0.8%

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.