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An mTOR/RNA pol I axis shapes chromatin architecture in response to fasting

Al-Refaie, N.; Padovani, F.; Binando, F.; Hornung, J.; Zhao, Q.; Towbin, B. D.; Sarinay Cenik, E.; Stroustrup, N.; Schmoller, K. M.; Cabianca, D. S.

2023-07-22 cell biology
10.1101/2023.07.22.550032 bioRxiv
Show abstract

Chromatin architecture is a fundamental mediator of genome function. Fasting is a major environmental cue across the animal kingdom. Yet, how it impacts on 3D genome organization is unknown. Here, we show that fasting induces a reversible and large-scale spatial reorganization of chromatin in C. elegans. This fasting-induced 3D genome reorganization requires inhibition of the nutrient-sensing mTOR pathway, a major regulator of ribosome biogenesis. Remarkably, loss of transcription by RNA Pol I, but not RNA Pol II nor Pol III, induces a similar 3D genome reorganization in fed animals, and prevents the restoration of the fed-state architecture upon restoring nutrients to fasted animals. Our work documents the first large-scale chromatin reorganization triggered by fasting and reveals that mTOR and RNA Pol I shape genome architecture in response to nutrients.

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