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treespat:an R package for spatial tree diversity analysis

Chianucci, F.; Puletti, N.; Cesaretti, L.

2023-05-24 ecology
10.1101/2023.05.22.541683 bioRxiv
Show abstract

Forest structure is a key element in understanding functionality and resilience of forest ecosystems. Analyses of forest structure and diversity have traditionally employed non-spatial measures, due to the simplicity of such approach. However, spatial structure can provide a deeper understanding of tree patterns, but widespread use of a spatially-explicit approach has been often limited by the complexity of theoretical equations and formulas, and the lack of freely distributed tools to calculate such spatial indices. To fill this gap we created the R package treespat, which allows to calculate some of the most diffuse stand-level spatial diversity indices. The document describes theory, basic definition and example application for using the treespat package. O_FIG O_LINKSMALLFIG WIDTH=174 HEIGHT=200 SRC="FIGDIR/small/541683v1_ufig1.gif" ALT="Figure 1"> View larger version (35K): org.highwire.dtl.DTLVardef@b631f7org.highwire.dtl.DTLVardef@18a85dcorg.highwire.dtl.DTLVardef@15a5f84org.highwire.dtl.DTLVardef@35146e_HPS_FORMAT_FIGEXP M_FIG C_FIG

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