Back

CoCl2 triggered pseudohypoxic stress induces proteasomal degradation of SIRT4 via polyubiquitination of lysines K78 and K299

Hampel, N.; Georgy, J.; Mehrabipour, M.; Lang, A.; Scheller, J.; Ahmadian, M. R.; Floss, D. M.; Piekorz, R. P.

2023-05-16 biochemistry
10.1101/2023.05.16.540489 bioRxiv
Show abstract

SIRT4 comprises together with SIRT3 and SIRT5 the mitochondrially localized subgroup of sirtuins. SIRT4 regulates via its NAD+-dependent enzymatic activities mitochondrial bioenergetics, dynamics (mitochondrial fusion), and quality control (mitophagy). Here, we address the regulation of SIRT4 itself by characterizing its protein stability and degradation upon CoCl2-induced pseudohypoxic stress that typically triggers mitophagy. Interestingly, within the mitochondrial sirtuins, only the protein levels of SIRT4 or ectopically expressed SIRT4-eGFP decrease upon CoCl2 treatment of HEK293 cells. Co-treatment with BafA1, an inhibitor of autophagosome-lysosome fusion required for autophagy/mitophagy, or the use of the proteasome inhibitor MG132 prevented CoCl2-induced SIRT4 downregulation. Consistent with the proteasomal degradation of SIRT4, the lysine mutants SIRT4(K78R) and SIRT4(K299R) showed significantly reduced polyubiquitination upon CoCl2 treatment and were more resistant to pseudohypoxia-induced degradation as compared to SIRT4. Moreover, SIRT4(K78R) and SIRT4(K299R) displayed increased basal protein stability as compared to wild-type SIRT4 when subjected to MG132 treatment or cycloheximide (CHX) chase assays. Thus, our data indicate that stress-induced protein degradation of SIRT4 occurs through two mechanisms, (i) via mitochondrial autophagy/mitophagy, and (ii) as a separate process via proteasomal degradation within the cytoplasm.

Matching journals

The top 9 journals account for 50% of the predicted probability mass.

1
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
28 papers in training set
Top 0.1%
10.1%
2
International Journal of Molecular Sciences
453 papers in training set
Top 0.2%
10.1%
3
Cell Death Discovery
51 papers in training set
Top 0.1%
10.1%
4
EMBO reports
136 papers in training set
Top 0.4%
4.8%
5
Cell Death & Disease
126 papers in training set
Top 0.2%
4.8%
6
The FEBS Journal
78 papers in training set
Top 0.1%
3.6%
7
Cells
232 papers in training set
Top 0.7%
3.6%
8
iScience
1063 papers in training set
Top 8%
2.6%
9
Cellular and Molecular Life Sciences
84 papers in training set
Top 0.1%
2.3%
50% of probability mass above
10
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
25 papers in training set
Top 0.2%
2.1%
11
Journal of Biological Chemistry
641 papers in training set
Top 1%
1.9%
12
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 3%
1.9%
13
Redox Biology
64 papers in training set
Top 0.4%
1.8%
14
Nature Communications
4913 papers in training set
Top 52%
1.7%
15
Biochemical Journal
80 papers in training set
Top 0.1%
1.5%
16
EMBO Reports
88 papers in training set
Top 0.2%
1.5%
17
eLife
5422 papers in training set
Top 45%
1.5%
18
PLOS ONE
4510 papers in training set
Top 60%
1.2%
19
Journal of Proteome Research
215 papers in training set
Top 2%
1.2%
20
Scientific Reports
3102 papers in training set
Top 68%
1.1%
21
Journal of Cellular Biochemistry
10 papers in training set
Top 0.1%
1.1%
22
Free Radical Biology and Medicine
33 papers in training set
Top 0.2%
1.1%
23
Molecular Metabolism
105 papers in training set
Top 1%
0.9%
24
Biochimica et Biophysica Acta (BBA) - Bioenergetics
17 papers in training set
Top 0.1%
0.9%
25
Bioscience Reports
25 papers in training set
Top 1%
0.9%
26
Journal of Cellular Physiology
21 papers in training set
Top 0.5%
0.9%
27
Mitochondrion
11 papers in training set
Top 0.1%
0.8%
28
Life Science Alliance
263 papers in training set
Top 1%
0.8%
29
The FASEB Journal
175 papers in training set
Top 3%
0.7%
30
Journal of Cell Science
353 papers in training set
Top 2%
0.7%