Spectroscopic insights into the mechanism of anammox hydrazine synthase
Versantvoort, W.; Hienerwadel, R.; Ferousi, C.; van der Velden, P.; Berthomieu, C.; van Niftrik, L.; Baymann, F.
Show abstract
Anaerobic ammonium oxidizing bacteria make a living oxidizing ammonium with nitrite as electron acceptor, intermediates nitric oxide and hydrazine, and end product dinitrogen gas. Hydrazine is a biologically unique free intermediate in this metabolism, and is produced by the enzyme hydrazine synthase. Crystallization of Candidatus Kuenenia stuttgartiensis hydrazine synthase allowed for an initial hypothesis of its reaction mechanism. In this hypothesis, nitric oxide is first reduced to hydroxylamine after which hydroxylamine is condensed with ammonium to form hydrazine. Hydrazine synthase is a tetraheme cytochrome c, containing two proposed active site hemes ({gamma}I & I) in the {gamma}- and -subunit, respectively, connected by an intra-enzymatic tunnel. Here we combined the data from electrochemistry-induced Fourier transform infrared (FTIR) spectroscopy, EPR and optical spectroscopy to shed light on the redox properties and protein dynamics of hydrazine synthase in the context of its reaction mechanism. Redox titrations revealed two low potential low spin hemes with midpoint potentials of [~]-360 mV and [~]-310 mV for heme II and {gamma}II, respectively. Heme {gamma}I showed redox transitions in the range of 0 mV, consisting of both low spin and high spin characteristics in optical and EPR spectroscopy. Electrochemistry-induced FTIR spectroscopy indicated an aspartic acid ligating a OH-/H2O at the heme {gamma}I axial site as a possible candidate for involvement in this mixed spin characteristic. Furthermore, EPR spectroscopy confirmed the ability of heme {gamma}I to bind NO in the reduced state. Heme I exhibited a rhombic high spin signal, in line with its ligation by a proximal tyrosine observed in the crystal structure. Redox titrations down to -610 mV nor addition of dithionite resulted in the reduction of heme I, indicating a very low midpoint potential for this heme. In vivo chemistry at this heme I, the candidate for the comproportionation of hydroxylamine and ammonium, is thus likely to be initiated solely on the oxidized heme, in contrast to previously reported DFT calculations. The reduction potentials of the {gamma}-subunit hemes were in line with the proposed electron transfer of heme {gamma}II to heme {gamma}I for the reduction of NO to hydroxylamine (E0 = - 30 mV).
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Intra-dimer cooperativity between the active site cysteines during the oxidation of peroxiredoxin 2 93%
- Rhodanese Rdl2 produces reactive sulfur species to scavenge hydroxyl radical and protect mitochondria 92%
- In-vivo protein nitration and de-nitration facilitate Vibrio cholerae cell survival under anaerobic condition: Consequences of Nitrite induced protein nitration 91%
Similar papers in this journal
- A clickable photosystem I, ferredoxin, and ferredoxin NADP+ reductase fusion system for light-driven NADPH regeneration 94%
- Assessing Lanthanide-Dependent Methanol Dehydrogenase Activity: The Assay Matters 93%
- Characterization of a novel mesophilic CTP-dependent riboflavin kinase and rational engineering to create its thermostable homologs 92%
Similar papers in this journal
Similar papers in this journal
- A natural fusion of flavodiiron, rubredoxin, and NADH:rubredoxin oxidoreductase domains is the highly efficient water-forming oxidase of T. vaginalis 92%
- Phenol Sensing in Nature Modulated via a Conformational Switch Governed by Dynamic Allostery 92%
- NMR structures and functional roles of two related chitin-binding domains of a lytic polysaccharide monooxygenase from Cellvibrio japonicus 91%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.