Back

Mechanistic insights into the role of Ca2+-stimulated AMPK in the secretion of cellulases during carbon stress

Randhawa, A.; Sinha, T.; Das, M.; Ogunyewo, O. A.; Jawed, K.; Yazdani, S. S.

2023-01-17 cell biology
10.1101/2023.01.16.524192 bioRxiv
Show abstract

The response of filamentous fungi towards recalcitrant carbohydrates is majorly governed by transcriptional activators of cellulase genes; however, little is known about the downstream events beyond transcription. We show here in Penicillium funiculosum that increasing the expression of a transcriptional activator CLR-2 in the catabolically derepressed strain, {Delta}Mig1, didnt exhibit a synergistic effect on cellulase production unless Ca2+ was simultaneously increased. The RNA-seq screen for Ca2+-activated kinases identified SNF1-AMPK and SSP1-AMPKK as being specific to cellulose induction. Deletion of snf1 led to negligible secretion of cellulase upon induction. Quantitative whole-cell proteomics followed by chemical-genetic experiments with snf1-deleted strain showed that Ca2+-signaling channelizes carbon, nitrogen and energy sources towards cellulase production. Further, Ca2+-signaling phosphorylates SNF1-AMPK via SSP1, which in turn downregulates the phospho-HOG1 levels, leading to stimulus for cellulase secretion during carbon stress. The findings reported here are significant for understanding fungal pathology and developing second-generation biorefineries.

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Journal of Fungi
32 papers in training set
Top 0.1%
44.6%
2
eLife
5828 papers in training set
Top 23%
5.3%
3
Scientific Reports
3612 papers in training set
Top 21%
4.7%
50% of probability mass above
4
mBio
833 papers in training set
Top 5%
3.9%
5
Microbiological Research
22 papers in training set
Top 0.1%
3.1%
6
Fungal Genetics and Biology
14 papers in training set
Top 0.1%
3.1%
7
Nature Communications
5641 papers in training set
Top 38%
2.7%
8
Metabolic Engineering
75 papers in training set
Top 0.5%
1.7%
9
Molecular Biology of the Cell
311 papers in training set
Top 2%
1.7%
10
iScience
1154 papers in training set
Top 18%
1.7%
11
Biotechnology for Biofuels
14 papers in training set
Top 0.2%
1.3%
12
New Phytologist
346 papers in training set
Top 4%
1.3%
13
mSystems
394 papers in training set
Top 5%
1.3%
14
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 36%
1.1%
15
Journal of Cell Science
393 papers in training set
Top 4%
1.1%
16
mSphere
302 papers in training set
Top 5%
1.1%
17
Current Biology
665 papers in training set
Top 9%
1.0%
18
PLOS Genetics
862 papers in training set
Top 11%
1.0%
19
Microbiology Spectrum
469 papers in training set
Top 9%
1.0%
20
Communications Biology
993 papers in training set
Top 28%
0.9%
21
The FEBS Journal
93 papers in training set
Top 2%
0.8%
22
Life Science Alliance
285 papers in training set
Top 8%
0.8%
23
PLOS ONE
5266 papers in training set
Top 63%
0.8%
24
Cell Reports
1498 papers in training set
Top 30%
0.6%
25
Journal of Proteomics
28 papers in training set
Top 0.6%
0.6%
26
Genomics, Proteomics & Bioinformatics
172 papers in training set
Top 2%
0.6%
27
Microbial Genomics
225 papers in training set
Top 3%
0.6%