Back

Non-generalizability of biomarkers for mortality in SARS-CoV-2: a meta-analyses series

Shuvo, M. R.; Schweining, M.; Soares, F.; Feng, O.; Abreu, S.; Veale, N.; Thomas, W.; Thompson, A. R.; Samworth, R.; Morrell, N. W.; Marciniak, S.; Soon, E.

2022-12-07 respiratory medicine
10.1101/2022.12.03.22282974 medRxiv
Show abstract

Rationale: Sophisticated prognostic scores have been proposed for SARS-CoV-2 but do not always perform consistently. We conducted these meta-analyses to uncover why and to investigate the impact of vaccination and variants. Methods: We searched the PubMed database for the keywords "SARS-CoV-2" with "biomarker" and "mortality" for the baseline tranche (01/12/2020-30/06/2021) and either "SARS-CoV-2" or "Covid19" with "biomarker" and either "vaccination" or "variant" from 01/12/2020 to 31/10/2023. To aggregate the data, the meta library in R was used, and a random effects model fitted to obtain pooled AUCs and 95% confidence intervals for the European/North American, Asian, and overall datasets. Results: Biomarker effectiveness varies significantly in different continents. Admission CRP levels were a good prognostic marker for mortality due to wild-type virus in Asian countries, with a pooled area under curve (AUC) of 0.83 (95%CI 0.80-0.85), but only an average predictor of mortality in Europe/North America, with a pooled AUC of 0.67 (95%CI 0.63-0.71, P<0.0001). We observed the same pattern for D-dimer and IL-6. This variability explains why the proposed prognostic scores did not perform evenly. Notably, urea and troponin had pooled AUCs [&ge;]0.78 regardless of location, implying that end-organ damage at presentation is a key prognostic factor. The inflammatory biomarkers (CRP, D-dimer and IL-6) have generally declined in effectiveness in the vaccinated and variant cohorts. We note a significant lag from the pandemic advent to data availability and this has no doubt impacted on patient care. Conclusions: Biomarker efficacies vary considerably by region. It is imperative that the infrastructure for collecting clinical data should be put in place ahead of a future pandemic.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

50% of probability mass above

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.