Back

Enrichment and application of bacterial sialic acids containing polymers from the extracellular polymeric substances of Candidatus Accumulibacter

Tomas-Martinez, S.; Chen, L. M.; Pabst, M.; Weissbrodt, D. G.; van Loosdrecht, M. C. M.; Lin, Y.

2022-09-16 microbiology
10.1101/2022.09.16.508216 bioRxiv
Show abstract

Pseudaminic and legionaminic acids are a subgroup of nonulosonic acids (NulOs) unique to bacterial species. There is a lack of advances in the study of these NulOs due to their complex synthesis and production. Recently, it was seen that "Candidatus Accumulibacter" can produce Pse or Leg analogues as part of its extracellular polymeric substances (EPS). In order to employ a "Ca. Accumulibacter" enrichment as production platform for bacterial sialic acids, it is necessary to determine which fractions of the EPS of "Ca. Accumulibacter" contain NulOs and how to enrich and/or isolate them. We extracted the EPS from granules enriched with "Ca. Accumulibcater" and used size-exclusion chromatography to separate them into different molecular weight fractions. This separation resulted in two high molecular weight (> 5,500 kDa) fractions dominated by polysaccharides, with a NulO content up to 4 times higher than the extracted EPS. This suggests that NulOs in "Ca. Accumulibacter" are likely located in high molecular weight polysaccharides. Additionally, it was seen that the extracted EPS and the NulO-rich fractions can bind and neutralize histones. This suggest that they can serve as source for sepsis treatment drugs, although further purification needs to be evaluated. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=104 SRC="FIGDIR/small/508216v1_ufig1.gif" ALT="Figure 1"> View larger version (16K): org.highwire.dtl.DTLVardef@1f59ff7org.highwire.dtl.DTLVardef@d933fcorg.highwire.dtl.DTLVardef@1e3ff78org.highwire.dtl.DTLVardef@1994948_HPS_FORMAT_FIGEXP M_FIG C_FIG HighlightsO_LINulOs in "Ca. Accumulibacter" are likely located in high molecular weight polysaccharides. C_LIO_LISize exclusion chromatography allows to obtain high molecular weight polysaccharide-rich fractions enriched with NulOs. C_LIO_LIEPS and the NulOs-rich fractions can serve as source for sepsis treatment drugs. C_LI

Matching journals

The top 19 journals account for 50% of the predicted probability mass.

1
ACS Omega
90 papers in training set
Top 0.1%
10.4%
2
Frontiers in Microbiology
375 papers in training set
Top 1%
5.0%
3
Food & Function
12 papers in training set
Top 0.1%
4.3%
4
Biotechnology and Bioengineering
49 papers in training set
Top 0.2%
3.7%
5
Pharmaceuticals
33 papers in training set
Top 0.3%
2.8%
6
Computational and Structural Biotechnology Journal
216 papers in training set
Top 3%
2.1%
7
PLOS ONE
4510 papers in training set
Top 47%
2.1%
8
Scientific Reports
3102 papers in training set
Top 49%
2.1%
9
Glycobiology
30 papers in training set
Top 0.1%
1.8%
10
eLife
5422 papers in training set
Top 40%
1.7%
11
RSC Advances
18 papers in training set
Top 0.5%
1.7%
12
Frontiers in Chemistry
14 papers in training set
Top 0.1%
1.7%
13
Microbiology Spectrum
435 papers in training set
Top 2%
1.7%
14
Journal of Colloid and Interface Science
12 papers in training set
Top 0.2%
1.7%
15
Journal of Proteome Research
215 papers in training set
Top 1%
1.7%
16
BMC Microbiology
35 papers in training set
Top 0.6%
1.7%
17
npj Biofilms and Microbiomes
56 papers in training set
Top 1%
1.5%
18
Journal of Biomedical Materials Research Part A
18 papers in training set
Top 0.2%
1.5%
19
Analytical Chemistry
205 papers in training set
Top 2%
1.5%
50% of probability mass above
20
mSphere
281 papers in training set
Top 4%
1.4%
21
Microbial Cell Factories
22 papers in training set
Top 0.3%
1.4%
22
Microbial Biotechnology
29 papers in training set
Top 0.5%
1.4%
23
Molecules
37 papers in training set
Top 1%
1.3%
24
International Journal of Biological Macromolecules
65 papers in training set
Top 2%
1.3%
25
Bioresource Technology
11 papers in training set
Top 0.3%
1.3%
26
Science of The Total Environment
179 papers in training set
Top 4%
1.1%
27
Water Research
74 papers in training set
Top 1%
1.0%
28
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 4%
1.0%
29
mSystems
361 papers in training set
Top 6%
0.9%
30
Biotechnology for Biofuels
11 papers in training set
Top 0.2%
0.9%