Back

AUF-1 knock down in mice overarches butyrate driven hypo-cholesteraemia by conjuring AUF-1-Dicer-1-miR122 hierarchy

DAS, O.; KUNDU, J.; GHOSH, A.; GAUTAM, A.; GHOSH, S.; CHAKRABORTY, M.; MASID, A.; GAURI, S. S.; MITRA, D.; DUTTA, M.; MUKHERJEE, B.; SINHA, S.; BHAUMIK, M.

2022-06-16 systems biology
10.1101/2022.06.13.496022 bioRxiv
Show abstract

This discourse probes the mechanistic molecular details of butyrate action in maintaining host-cholesterol balance. Hepatic miR122 being the most indispensable regulator of cholesterol metabolic enzymes, we studied upstream players of miR122 biogenesis in the presence and absence of butyrate in Huh7 cells and mice model. We showed that butyrate treatment caused upregulation of RNA-binding protein, AUF-1 resulting in RNase-III nuclease, Dicer-1 instability, and significant diminution of miR122. We proved its importance of AUF-1 and sequential downstream players in AUF-1-knock-down mice. We synthesized unique self-transfecting GMO (guanidinium-morpholino-oligonucleotides) linked PMO (Phosphorodiamidate-Morpholino Oligonucleotides)-based antisense reagent and injection of which in mouse caused near absence of AUF-1 coupled with increased Dicer-1 and miR122, and reduced serum cholesterol regardless of butyrate treatment indicating that butyrate acts though AUF-1. The roster of intracellular players was as follows: AUF-1-Dicer-1-miR122 for triggering butyrate driven hypocholesterlaemia. To our knowledge this is the first report linking AUF-1 with cholesterol biogenesis.

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
Scientific Reports
3612 papers in training set
Top 5%
9.0%
2
The Journal of Nutritional Biochemistry
13 papers in training set
Top 0.1%
8.0%
3
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
26 papers in training set
Top 0.1%
8.0%
4
eLife
5828 papers in training set
Top 15%
7.4%
5
iScience
1154 papers in training set
Top 1%
6.4%
6
Frontiers in Nutrition
24 papers in training set
Top 0.1%
4.9%
7
Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids
15 papers in training set
Top 0.1%
4.4%
8
Journal of Lipid Research
39 papers in training set
Top 0.1%
4.4%
50% of probability mass above
9
International Journal of Molecular Sciences
494 papers in training set
Top 2%
4.4%
10
Frontiers in Molecular Biosciences
102 papers in training set
Top 0.3%
2.7%
11
Molecular Omics
23 papers in training set
Top 0.1%
2.5%
12
Communications Biology
993 papers in training set
Top 12%
1.9%
13
Cells
249 papers in training set
Top 3%
1.8%
14
PLOS ONE
5266 papers in training set
Top 48%
1.8%
15
The FEBS Journal
93 papers in training set
Top 0.9%
1.5%
16
Metabolites
53 papers in training set
Top 0.6%
1.4%
17
Cellular and Molecular Life Sciences
96 papers in training set
Top 1.0%
1.4%
18
Hepatology Communications
22 papers in training set
Top 0.3%
1.1%
19
FASEB BioAdvances
18 papers in training set
Top 0.2%
1.1%
20
Life Science Alliance
285 papers in training set
Top 5%
1.1%
21
Gut Microbes
78 papers in training set
Top 1%
1.1%
22
Nature Communications
5641 papers in training set
Top 52%
1.1%
23
The FASEB Journal
194 papers in training set
Top 4%
1.1%
24
Frontiers in Cell and Developmental Biology
233 papers in training set
Top 4%
0.9%
25
The Journal of Nutrition
25 papers in training set
Top 0.6%
0.9%
26
Endocrinology
43 papers in training set
Top 0.8%
0.6%
27
mSystems
394 papers in training set
Top 6%
0.6%
28
ACS Omega
105 papers in training set
Top 4%
0.6%
29
Molecular Metabolism
112 papers in training set
Top 2%
0.6%