First brain de-novo transcriptome of Tyrrenhian tree frog, Hyla sarda, for the study of dispersal-related behavioral variation
Libro, P.; Bisconti, R.; Chiocchio, A.; Spadavecchia, G.; Castrignano, T.; Canestrelli, D.
Show abstract
Dispersal is a key process in ecology and evolution as it contributes to shaping the spatial patterns of biological diversity at all its levels of organization. Growing evidence is unveiling the role of phenotypic trait variation in affecting dispersal dynamics of populations, and that substantial, rapid, and directional changes in the phenotypic makeup of populations would occur during range expansions by spatial sorting of dispersal-related traits. Accordingly, selective pressures at the front of a range expansion wave would actively promote individuals with higher dispersal abilities. Although many studies have been focusing on phenotypic trait evolution during range expansion, its genomic underpinnings are almost unexplored, hampering a thorough understanding of the evolutionary processes involved during dispersal. The Tyrrhenian tree frog Hyla sarda is a small amphibian endemic to the Tyrrhenian islands. According to previous phylogeographic studies, H. sarda underwent a northward range expansion from the north of Sardinia (western Mediterranean sea) during the last glacial phase. The colonization of the Corsica island was allowed by the temporary formation of a wide land bridge connecting Sardinia and Corsica, induced by the marine regression occurred during the last glacial maximum. The postglacial loss of this land bridge prevented any subsequent gene flow between Corsican and Sardinian populations. As a consequence, the genetic and phenotypic legacies of this range expansion event can still be detected in current populations, which makes H. sarda an interesting candidate species for the study of the genetic underpinnings of phenotypic trait evolution during range expansions. Here, we contribute to the investigation of the genetic underpinning phenotypic trait evolution during range expansion, by generating the first brain de-novo transcriptome of H. sarda. We focused on the brain transcriptome as behavioural variation at personality traits has been identified as a key component of the dispersal syndromes, substantial personality traits variation has been observed within H. sarda populations, and brain gene expression patterns have been linked to a vast number of behavioural responses to environmental stimuli.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Near-chromosome level genome assembly of devil firefish, Pterois miles 97%
- Chromosome level genome reference of the Caucasian dwarf goby Knipowitschia cf. caucasica, a new alien Gobiidae invadingthe River Rhine 96%
- High quality genome assembly of the brown hare (Lepus europaeus) with chromosome-level scaffolding 94%
Similar papers in this journal
- A high-quality functional genome assembly of Delia radicum L. (Diptera: Anthomiidae) annotated from egg to adult 95%
- An ancient truncated duplication of the anti-Mullerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family 95%
- Chromosome-level hybrid de novo genome assemblies as an attainable option for non-model organisms 95%
Similar papers in this journal
- Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing 94%
- Transcriptomic landscape of posterior regeneration in the annelid Platynereis dumerilii 93%
- The genome of a vestimentiferan tubeworm (Ridgeia piscesae) provides insights into its adaptation to a deep-sea environment 93%
Similar papers in this journal
- A high-quality Genome and Comparison of Short versus Long Read Transcriptome of the Palaearctic duck Aythya fuligula (Tufted Duck) 94%
- Chromosome-level reference genome for the medically important Arabian horned viper (Cerastes gasperettii) 93%
- Haplogenomes of Eucalyptus urophylla and E. grandis 93%
Similar papers in this journal
- The genome sequence of the octocoral Paramuricea clavata - a key resource to study the impact of climate change in the Mediterranean 96%
- De novo genome assembly of the land snail Candidula unifasciata (Mollusca: Gastropoda) 96%
- Genome and transcriptome analysis of the beet armyworm Spodoptera exigua reveals targets for pest control 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.