Back

Understanding Post-Acute Sequelae of SARS-CoV-2 Infection through Data-Driven Analysis with the Longitudinal Electronic Health Records: Findings from the RECOVER Initiative

Zang, C.; Zhang, Y.; Xu, J.; Bian, J.; Morozyuk, D.; Schenck, E. J.; Khullar, D.; Nordvig, A. S.; Shenkman, E. A.; Rothman, R. L.; Block, J. P.; Lyman, K.; Weiner, M.; Carton, T. W.; Wang, F.; Kaushal, R.

2022-05-22 health informatics
10.1101/2022.05.21.22275420 medRxiv
Show abstract

Recent studies have investigated post-acute sequelae of SARS-CoV-2 infection (PASC) using real-world patient data such as electronic health records (EHR). Prior studies have typically been conducted on patient cohorts with small sample sizes1 or specific patient populations2,3 limiting generalizability. This study aims to characterize PASC using the EHR data warehouses from two large national patient-centered clinical research networks (PCORnet), INSIGHT and OneFlorida+, which include 11 million patients in New York City (NYC) and 16.8 million patients in Florida respectively. With a high-throughput causal inference pipeline using high-dimensional inverse propensity score adjustment, we identified a broad list of diagnoses and medications with significantly higher incidence 30-180 days after the laboratory-confirmed SARS-CoV-2 infection compared to non-infected patients. We found more PASC diagnoses and a higher risk of PASC in NYC than in Florida, which highlights the heterogeneity of PASC in different populations.

Matching journals

The top 7 journals account for 50% of the predicted probability mass.

1
npj Digital Medicine
97 papers in training set
Top 0.3%
17.5%
2
Med
38 papers in training set
Top 0.1%
8.2%
3
Patterns
70 papers in training set
Top 0.1%
7.2%
4
Journal of the American Medical Informatics Association
61 papers in training set
Top 0.5%
6.4%
5
Nature Communications
4913 papers in training set
Top 28%
6.4%
6
The Lancet Digital Health
25 papers in training set
Top 0.1%
4.0%
7
Cell Reports Medicine
140 papers in training set
Top 1%
3.6%
50% of probability mass above
8
Scientific Reports
3102 papers in training set
Top 41%
3.1%
9
iScience
1063 papers in training set
Top 12%
1.9%
10
Communications Medicine
85 papers in training set
Top 0.2%
1.8%
11
Science Advances
1098 papers in training set
Top 16%
1.8%
12
JAMA
17 papers in training set
Top 0.1%
1.7%
13
Journal of Medical Internet Research
85 papers in training set
Top 3%
1.7%
14
Communications Biology
886 papers in training set
Top 11%
1.5%
15
Nature Biomedical Engineering
42 papers in training set
Top 1%
1.3%
16
Nature Computational Science
50 papers in training set
Top 0.9%
1.3%
17
Advanced Science
249 papers in training set
Top 14%
1.2%
18
Science Translational Medicine
111 papers in training set
Top 4%
1.2%
19
European Respiratory Journal
54 papers in training set
Top 1%
1.1%
20
Nature Medicine
117 papers in training set
Top 3%
1.1%
21
Journal of Personalized Medicine
28 papers in training set
Top 0.8%
0.9%
22
eLife
5422 papers in training set
Top 52%
0.9%
23
Annals of Internal Medicine
27 papers in training set
Top 0.8%
0.9%
24
Journal of Infection
71 papers in training set
Top 3%
0.8%
25
Journal of Biomedical Informatics
45 papers in training set
Top 1%
0.8%
26
JAMIA Open
37 papers in training set
Top 1%
0.8%
27
Nature Machine Intelligence
61 papers in training set
Top 3%
0.8%
28
eBioMedicine
130 papers in training set
Top 4%
0.7%
29
Clinical and Translational Medicine
30 papers in training set
Top 1%
0.7%
30
Nature
575 papers in training set
Top 15%
0.7%