Back

Spinning Disk Multifocal Microscopy for Dynamic Arbitrarily Shaped Surface Imaging at Centimetre Scale and Micrometre Resolution

Xie, H.; Han, X.; Xiao, G.; Xu, H.; Zhang, Y.; Zhang, G.; Li, Q.; He, J.; Zhu, D.; Yu, X.; Dai, Q.

2022-02-24 bioengineering
10.1101/2022.02.22.481397 bioRxiv
Show abstract

The large-scale fluorescence microscopy has enabled the observation of dynamic physiological activities at the single cellular level across the mouse cortex, such as distributed neuronal population representations. However, video-rate high-resolution microscopy at sophisticated biological surfaces in nature keeps a challenging task for the tradeoff between the speed, resolution, and field of view. Here we propose Spinning Disk Multifocal Microscopy (SDiM) for arbitrarily shaped surfaces, which enables imaging at centimeter field-of-view, micrometer resolution and up to 30 frames per second across the depth range of 450 {micro}m. We apply this technique in various microscopic systems, including customized macroscopic systems and the Real-time Ultra-large-Scale imaging at High resolution macroscopy (RUSH), in both the reflective mode and the fluorescence mode, and in the study of cortex-wide single-neuron imaging and immune cell tracking. SDiM provides an opportunity for studying the cortex-wide multi-scale cellular interactions in biological tissues.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Light: Science & Applications
16 papers in training set
Top 0.1%
17.9%
2
Nature Methods
385 papers in training set
Top 0.8%
11.5%
3
Optica
27 papers in training set
Top 0.1%
11.5%
4
Nature Communications
5641 papers in training set
Top 16%
11.5%
50% of probability mass above
5
Communications Biology
993 papers in training set
Top 4%
3.9%
6
Advanced Intelligent Systems
11 papers in training set
Top 0.1%
3.9%
7
Optics Express
26 papers in training set
Top 0.1%
3.1%
8
ACS Nano
113 papers in training set
Top 0.7%
3.1%
9
ACS Photonics
13 papers in training set
Top 0.1%
3.1%
10
Scientific Reports
3612 papers in training set
Top 41%
2.6%
11
npj Imaging
12 papers in training set
Top 0.1%
2.3%
12
Nature Photonics
10 papers in training set
Top 0.1%
2.3%
13
Advanced Science
286 papers in training set
Top 3%
2.3%
14
Science Advances
1243 papers in training set
Top 17%
2.0%
15
Nature Biotechnology
172 papers in training set
Top 3%
1.7%
16
Small Methods
29 papers in training set
Top 0.3%
1.7%
17
Nano Letters
71 papers in training set
Top 0.8%
1.4%
18
Lab on a Chip
96 papers in training set
Top 0.8%
1.1%
19
eLife
5828 papers in training set
Top 59%
1.1%
20
Biosensors and Bioelectronics
57 papers in training set
Top 0.7%
1.0%
21
Optics Letters
13 papers in training set
Top 0.1%
1.0%
22
Cell Reports Methods
165 papers in training set
Top 4%
0.8%
23
iScience
1154 papers in training set
Top 37%
0.8%
24
Biomedical Optics Express
95 papers in training set
Top 1%
0.6%
25
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 46%
0.6%