An integrative method for COVID-19 patients classification from chest X-ray using deep learning network with image visibility graph as feature extractor
Pal, M.; Tiwari, Y.; Reddy, T. V.; Parisineni, S. R. A.; Panigrahi, P. K.
Show abstract
We propose a method by integrating image visibility graph and deep neural network (DL) for classifying COVID-19 patients from their chest X-ray images. The computed assortative coefficient from each image horizonal visibility graph (IHVG) is utilized as a physical parameter feature extractor to improve the accuracy of our image classifier based on Resnet34 convolutional neural network (CNN). We choose the most optimized recently used CNN deep learning model, Resnet34 for training the pre-processed chest X-ray images of COVID-19 and healthy individuals. Independently, the preprocessed X-ray images are passed through a 2D Haar wavelet filter that decomposes the image up to 3 labels and returns the approximation coefficients of the image which is used to obtain the horizontal visibility graph for each X-ray image of both healthy and COVID-19 cases. The corresponding assortative coefficients are computed for each IHVG and was subsequently used in random forest classifier whose output is integrated with Resnet34 output in a multi-layer perceptron to obtain the final improved prediction accuracy. We employed a multilayer perceptron to integrate the feature predictor from image visibility graph with Resnet34 to obtain the final image classification result for our proposed method. Our analysis employed much larger chest X-ray image dataset compared to previous used work. It is demonstrated that compared to Resnet34 alone our integrative method shows negligible false negative conditions along with improved accuracy in the classification of COVID-19 patients. Use of visibility graph in this model enhances its ability to extract various qualitative and quantitative complex network features for each image. Enables the possibility of building disease network model from COVID-19 images which is mostly unexplored. Our proposed method is found to be very effective and accurate in disease classification from images and is computationally faster as compared to the use of multimode CNN deep learning models, reported in recent research works. SignificanceAn integrative method is proposed combining convolutional neural networks and 2D visibility graphs through a multilayer perceptron, for effective classification of COVID-19 patients from the chest x-ray images. In our study, the computed assortative coefficient from the horizontal visibility graph of each wavelet filtered X-ray image is used as a physical feature extractor. We demonstrate that compared to Resnet34 alone, our proposed integrative approach shows significant reduction in false negative conditions and higher accuracy in the classification of COVID-19 patients. The method is computationally faster and with the use of visibility graph, it also enables one to extract complex network based qualitative and quantitative parameters for each subject for additional understandings like disease network model building and its structures etc.
Matching journals
The top 4 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- DermoExpert: Skin lesion classification using a hybrid convolutional neural network through segmentation, transfer learning, and augmentation 94%
- An Inexpensive Smartphone-Based Device and Predictive Models for Rapid, Non-Invasive, and Point-of-Care Monitoring of Ocular and Cardiovascular Complications Related to Diabetes 94%
- Extensive In Silico Analysis of the Functional and Structural Consequences of SNPs in Human ARX Gene 94%
Similar papers in this journal
- Improving Tuberculosis Detection in Chest X-ray Images through Transfer Learning and Deep Learning: A Comparative Study of CNN Architectures 94%
- Predicting COVID-19 Pandemic in Saudi Arabia Using Modified Singular Spectrum Analysis 93%
- The Impact of SARS-CoV-2 Lineages (Variants) on the COVID-19 Epidemic in South Africa 91%
Similar papers in this journal
- Hilbert-Envelope Features for Cardiac Disease Classification from Noisy Phonocardiograms 94%
- Evaluating three different adaptive decomposition methods for EEG signal seizure detection and classification 92%
- A Transfer Entropy-based methodology to analyze information flow under eyes-open and eyes-closed conditions with a clinical perspective 92%
Similar papers in this journal
- Estimation of Three-Dimensional Chromatin Morphology for Nuclear Classification and Characterisation 97%
- Comparing protein-protein interaction networks of SARS-CoV-2 and (H1N1) influenza using topological features 95%
- A Convolution Based Computational Approach Towards DNA N6-methyladenine Site Identification and Motif Extraction in Rice Genome 95%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.