Back

Chemical inhibition of auxin inactivation pathway uncovers the metabolic turnover of auxin homeostasis

Fukui, K.; Arai, K.; Tanaka, Y.; Aoi, Y.; Kukshal, V.; Jez, J. M.; Kubes, M. F.; Napier, R.; Zhao, Y.; Kasahara, H.; Hayashi, K.-i.

2021-10-13 plant biology
10.1101/2021.10.12.464031 bioRxiv
Show abstract

The phytohormone auxin, specifically indole-3-acetic acid (IAA) plays a prominent role in plant development. Cellular auxin concentration is coordinately regulated by auxin synthesis, transport, and inactivation to maintain auxin homeostasis; however, the physiological contribution of auxin inactivation to auxin homeostasis has remained elusive. The GH3 genes encode auxin amino acid conjugating enzymes that perform a central role in auxin inactivation. The chemical inhibition of GH3s in planta is challenging because the inhibition of GH3 enzymes leads to IAA overaccumulation that rapidly induces GH3 expression. Here, we developed a potent GH3 inhibitor, designated as kakeimide (KKI), that selectively targets auxin-conjugating GH3s. Chemical knockdown of the auxin inactivation pathway demonstrates that auxin turnover is very rapid (about 10 min), indicating auxin biosynthesis and inactivation dynamically regulate auxin homeostasis.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Molecular Plant
36 papers in training set
Top 0.1%
22.2%
2
Nature Communications
4913 papers in training set
Top 6%
18.3%
3
Nature Plants
84 papers in training set
Top 0.3%
6.2%
4
eLife
5422 papers in training set
Top 18%
4.8%
50% of probability mass above
5
Genomics, Proteomics & Bioinformatics
171 papers in training set
Top 1%
4.2%
6
Plant Communications
35 papers in training set
Top 0.3%
4.1%
7
Science Advances
1098 papers in training set
Top 5%
3.8%
8
Science China Life Sciences
26 papers in training set
Top 0.5%
3.0%
9
Cell Reports
1338 papers in training set
Top 20%
2.3%
10
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 26%
2.3%
11
Developmental Cell
168 papers in training set
Top 7%
2.0%
12
Science
429 papers in training set
Top 13%
1.9%
13
Cell Discovery
54 papers in training set
Top 3%
1.8%
14
New Phytologist
309 papers in training set
Top 3%
1.7%
15
Protein & Cell
25 papers in training set
Top 1%
1.6%
16
Advanced Science
249 papers in training set
Top 13%
1.3%
17
Nature Chemical Biology
104 papers in training set
Top 2%
1.3%
18
Plant Physiology
217 papers in training set
Top 2%
1.2%
19
Horticulture Research
43 papers in training set
Top 1%
1.2%
20
The Plant Cell
141 papers in training set
Top 2%
0.9%
21
Journal of Genetics and Genomics
36 papers in training set
Top 2%
0.9%
22
PLOS Biology
408 papers in training set
Top 17%
0.9%
23
Journal of Experimental Botany
195 papers in training set
Top 3%
0.9%
24
The Plant Journal
197 papers in training set
Top 3%
0.9%
25
Cell Host & Microbe
113 papers in training set
Top 5%
0.7%
26
PLOS ONE
4510 papers in training set
Top 70%
0.7%