A gender-bias-mitigated, data-driven precision medicine system to assist in the selection of biological treatments of grade 3 and 4 knee osteoarthritis: development and preliminary validation of precisionKNEE
Heidari, N.; Parkin, J. M.; Olgiati, S.; Meloni, D.; Fish, B.; Noorani, A.; Slevin, M.; Azamfirei, L.
Show abstract
IntroductionOsteoarthritis is a leading cause of global disability and is set to worsen with the concurrent rise in rates of obesity and an ageing population [1]. Current clinical solutions are sub-optimal with regards to their invasiveness and outcomes. Orthopaedic biologics is an emerging field that offers alternative and parallel treatment options to address this problem. Determining which patients will benefit most from these novel treatments is key in developing clinical pathways. MethodsOur dataset included 329 patients treated with microfragmented fat injection (MFAT) over a 2 year period. Clinico-demographic data was recorded as well as 1-year Oxford Knee Score (OKS). The data was modelled to predict OKS 1-year response using Random Forest Regressors. Gender-bias was mitigated and outliers were hidden from the training model. The model was validated on raw test data and on a subset of patients with Kellgren-Lawrence grade 3 and 4 radiological evidence of arthritis, age greater than 64, preoperative OKS less than or equal to 27 and idiopathic aetiology of arthritis. ResultsThe mean age and mean body mass index (BMI) of patients in our dataset was 66.4 years, 26.9 respectively. 53.5% of patients had Kellgren-Lawrence grade 4 arthritis. The final models RMSE was 6.72, MAE was 5.38 and r-squared was 0.23 on raw test data. An RMSE of 9.77 and MAE of 7.81 was achieved when validating the model on our subset of patients. Wilcoxon signed rank tests found no evidence of predicted results being statistically significantly different to ground truth values (p {inverted question} 0.05). Preoperative OKS and Kellgren-Lawrence arthritis grade was the most important feature in our model. DiscussionOur model is performant and able to predict 1 year OKS response outcome within our set of patients. We have found key features of prediction and would recommend these are researched further to improve model performance. Our dataset does not compare outcomes with other standard treatments. We also dont compare outcomes with other biologic treatments. Ultimately, this research can be used as a tool to benefit both patients and clinicians in a combined decision-making process.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Demonstrating the Utility of Instrumented Gait Analysis in the Treatment of Children with Cerebral Palsy 94%
- Intra- and inter-rater reliability, agreement, and minimal detectable change of the handheld dynamometer in individuals with symptomatic hip osteoarthritis 94%
- Investigation of locomotive syndrome improvement by total hip arthroplasty in patients with hip osteoarthritis: a before-after comparative study focusing on 25-question geriatric locomotive function scale 93%
Similar papers in this journal
- Chronic Low Back Pain Patient Satisfaction with Lumbar Steroid Injection: a Data-Driven Analysis 93%
- Mechanical Metric for Skeletal Biomechanics Derived from Spectral Analysis of Stiffness matrix 93%
- Immediate effect of osteopathic techniques on human resting muscle tone in healthy subjects using myotonometry: A factorial randomized trial 92%
Similar papers in this journal
- A multiscale modeling approach to study the role of mechanics and inflammation in pathophysiology of articular cartilage 93%
- From Web to RheumaLpack: Creating a Linguistic Corpus for Exploitation and Knowledge Discovery in Rheumatology 90%
- Fluid-Structure Interactions of Peripheral Arteries Using a Coupled in silico and in vitro Approach 90%
Similar papers in this journal
- Standardizing Phenotypic Algorithms for the Classification of Degenerative Rotator Cuff Tear from Electronic Health Record Systems 92%
- Trajectories: a framework for detecting temporal clinical event sequences from health data standardized to the OMOP Common Data Model 89%
- Modeling physician variability to prioritize relevant medical record information 88%
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.