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Cryo-EM Structure of the Pol Polyprotein Provides Insights into HIV Maturation

Harrison, J. J. E. K.; Passos, D. O.; Bruhn, J. F.; Bauman, J. D.; Tuberty, L.; DeStefano, J. J.; Ruiz, F. X.; Lyumkis, D.; Arnold, E.

2021-10-04 biophysics
10.1101/2021.10.03.462959 bioRxiv
Show abstract

Many retroviral proteins are initially translated from unspliced full-length RNA as polyprotein precursors that are subsequently processed by the viral protease (PR) to yield the mature forms. In HIV-1, the enzymes, PR, reverse transcriptase (RT), and integrase (IN), are produced as part of the Gag-Pol polyprotein. While structures of the mature proteins have aided our understanding of catalytic mechanisms and the design of antiretroviral drugs, knowledge of the architecture and functional implications of the immature forms prior to PR-mediated cleavage is limited. We developed a system to produce and purify the HIV-1 Pol polyprotein intermediate precursor and determined its high-resolution cryo-EM structure. The RT portion of the polyprotein has an architecture similar to the mature RT p66/p51 heterodimer, and dimerization of the RT portion draws together two PR monomers to activate proteolytic processing. HIV-1 thus may leverage the dimerization interfaces in Pol to regulate the assembly and maturation of the polyprotein precursors.

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