Back

Clinical evaluation of a RT-LAMP SARS-CoV-2 test for the Point-Of-Care, rapid, low-cost, integrating sample solid phase extraction and on which reagents are lyophilized.

Coz, E.; Garneret, P.; Martin, E.; Freitas do Nascimento, D.; Vilquin, A.; Hoinard, D.; Feher, M.; Grassin, Q.; Vanhomwegen, J.; Manuguerra, J.-C.; Mukherjee, S.; Olivo-Marin, J.-C.; Brient-Litzler, E.; Merzoug, M.; collin, e.; Tabeling, P.; rossi, b.

2021-10-04 infectious diseases
10.1101/2021.10.03.21264480 medRxiv
Show abstract

ObjectivesDetermine the sensitivity and specificity of a Point-Of-Care test ( COVIDISC) for SARS-COV2. The novelty of the test is to integrate, on the same (low-cost) compact plastic/paper device, solid phase RNA extraction and RT-LAMP amplification, all reagents being freeze-dried on it. MethodRetrospective study with a cohort of 99 patients characterized by real-time RT-PCR. The 37 positive naso-pharyngeal samples cover a broad range of viral loads (from 5 gc /{micro}L to 2 106 gc/ {micro}L of sample). ResultsThe COVIDISC found 36 positives (out of 37 by IP4 RT-PCR protocols) and 63 negatives (out of 62 by RT-PCR). ConclusionThe sensitivity of the COVIDISC, found in this 99-patient retrospective study, is 97% and the specificity 100%.

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
Journal of Clinical Virology
62 papers in training set
Top 0.1%
19.0%
2
Clinical Microbiology and Infection
60 papers in training set
Top 0.1%
7.3%
3
PLOS ONE
4510 papers in training set
Top 25%
6.9%
4
Journal of Medical Virology
137 papers in training set
Top 0.5%
4.9%
5
Diagnostics
48 papers in training set
Top 0.4%
4.0%
6
Journal of Infection
71 papers in training set
Top 0.6%
3.1%
7
Journal of Medical Microbiology
20 papers in training set
Top 0.1%
3.1%
8
Journal of Clinical Microbiology
120 papers in training set
Top 0.7%
2.8%
50% of probability mass above
9
Scientific Reports
3102 papers in training set
Top 49%
2.1%
10
The American Journal of Tropical Medicine and Hygiene
60 papers in training set
Top 2%
1.9%
11
Frontiers in Medicine
113 papers in training set
Top 3%
1.9%
12
The Journal of Molecular Diagnostics
36 papers in training set
Top 0.2%
1.7%
13
Journal of Hospital Infection
27 papers in training set
Top 0.3%
1.7%
14
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 3%
1.7%
15
Journal of Virological Methods
36 papers in training set
Top 0.3%
1.7%
16
European Journal of Clinical Microbiology & Infectious Diseases
15 papers in training set
Top 0.1%
1.7%
17
Clinical Infectious Diseases
231 papers in training set
Top 3%
1.7%
18
Diagnostic Microbiology and Infectious Disease
21 papers in training set
Top 0.1%
1.7%
19
Infection
15 papers in training set
Top 0.1%
1.7%
20
International Journal of Infectious Diseases
126 papers in training set
Top 2%
1.4%
21
Microbiology Spectrum
435 papers in training set
Top 4%
1.2%
22
Eurosurveillance
80 papers in training set
Top 1%
1.0%
23
Clinical Chemistry
22 papers in training set
Top 0.6%
1.0%
24
Clinical Chemistry and Laboratory Medicine (CCLM)
12 papers in training set
Top 0.2%
0.9%
25
Journal of Clinical Medicine
91 papers in training set
Top 5%
0.9%
26
BMC Microbiology
35 papers in training set
Top 1%
0.8%
27
Heliyon
146 papers in training set
Top 5%
0.8%
28
Frontiers in Public Health
140 papers in training set
Top 8%
0.8%
29
Journal of Infection and Public Health
15 papers in training set
Top 0.7%
0.8%
30
The Lancet Microbe
43 papers in training set
Top 1%
0.7%