SARS-CoV-2 in the Republic of Guinea: Fragment and Whole-Genome Sequencing, Phylogenetic Analysis
Kritsky, A. A.; Krasnov, Y. M.; Keita, M.; Keita, S.; Fedorov, A. V.; Shevtsova, A. P.; Guseva, N. P.; Kazorina, E. V.; Sosedova, E. A.; Katyshev, A. D.; Naryshkina, E. A.; Kolomoets, E. V.; Shcherbakova, S. A.; Popova, A. Y.; Kutyrev, V. V.
Show abstract
Genetic diversity of SARS-CoV-2 isolates circulating in the Republic of Guinea in May and June 2020, as well as in March 2021, has been demonstrated using fragment (S gene) and whole genome sequencing of 14 strains. Analysis of nucleotide sequences and phylogenetic constructs make it possible to divide the studied strains into 3 groups. Comparison of the obtained data with the already available epidemiological data proves the initial importation of COVID-19 from Western European countries, and also demonstrates four independent import routes in two time periods (March 2020 and no later than March 2021).
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
Similar papers in this journal
- SARS-CoV-2 genomic monitoring in the Sao Paulo State unveils new sublineages of the AY.43 strain 96%
- Genomics of Post-Vaccination SARS-CoV-2 Infections During the Delta Dominated Second Wave of COVID-19 Pandemic, from Mumbai Metropolitan Region (MMR), India 96%
- Genomic diversity of SARS-CoV-2 in Pakistan during fourth wave of pandemic 95%
Similar papers in this journal
- SARS-like coronaviruses in horseshoe bats (Rhinolophus spp.) in Russia, 2020. 96%
- The Algerian chapter of SARS-CoV-2 pandemic: An evolutionary, genetic, and epidemiological prospect of the first wave 96%
- Detection and Molecular Characterization of Animal Adenovirus and Astrovirus from Western Maharashtra, India 96%
Similar papers in this journal
- Molecular analysis of several in-house rRT-PCR protocols for SARS-CoV-2 detection in the context of genetic variability of the virus in Colombia. 94%
- Characterizations of SARS-CoV-2 mutational profile, spike protein stability and viral transmission 94%
- SARS-CoV-2 introduction and lineage dynamics across three epidemic peaks in Southern Brazil: massive spread of P.1 94%
Similar papers in this journal
- Genomic epidemiology of SARS-CoV-2 divulge B.1, B.1.36, and B.1.1.7 as the most dominant lineages in first, second, and third wave of SARS-CoV-2 infections in Pakistan 96%
- The Spike protein of SARS-coV2 19B (S) clade mirrors critical features of viral adaptation and coevolution 95%
- Lessons from a multilaboratorial task force for diagnosis of a fatal toxoplasmosis outbreak in captive primates in Brazil 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.