Back

α1-COP delivers sphingolipid modifiers and controls plasmodesmal callose deposition in Arabidopsis

Iswanto, A. B. B.; Vu, M. H.; Kumar, R.; Shon, J. C.; Wu, S.; Kim, D.-R.; Sik, K. Y.; Hui, S. G.; Kang, H.; Kim, W. Y.; Kim, S. H.; Liu, K. H.; Kim, J.-Y.

2021-03-22 cell biology
10.1101/2021.03.22.436362 bioRxiv
Show abstract

Callose is a plant cell wall polymer in the form of {beta}-1,3-glucan, which regulates symplasmic channel size at plasmodesmata (PD). It plays a crucial role in a variety of processes in plants through the regulation of intercelluar symplasmic continuity. However, how to maintain callose homeostasis at PD in the molecular levels is poorly understood. To further elucidate the mechanism of PD callose homeostasis, we screened and identified an Arabidopsis mutant plant that exhibited excessive callose deposition at PD. Based on the Next-generation sequencing (NGS)-based mapping, other mutant allele analysis, and complementation assay, the mutated gene was shown to be 1-COP, which encodes a member of the COPI coatomer complex comprised of , {beta}, {beta}', {gamma}, {delta}, {varepsilon}, and {zeta} subunits. Since there is no report on the link between COPI and callose/PD, it was extremely curious to know the roles of 1-COP or COPI in PD regulation through callose deposition. Here, we report that loss-of-function of 1-COP directly elevates the callose accumulation at PD by affecting subcellular protein localization of callose degradation enzyme PdBG2. This process is linked to ERH1, an inositol phosphoryl ceramide synthase (IPCS), and glucosylceramide synthase (GCS) functions through physical interactions with the 1-COP protein. In addition, the loss-of-function of 1-COP also alters the subcellular localization of ERH1 and GCS proteins, results in a reduction of GlcCers and GlcHCers molecules, which are the key SL species for lipid raft formation. According to our findings, we propose that 1-COP protein, together with the SL modifiers controlling lipid raft compositions, regulates the function of GPI-anchored PD proteins and hence the callose turnover at PD and symplastic movement of biomolecules. Our findings provide the first key clue to link the COPI-mediated intracellular trafficking pathway to the callose-mediated intercellular signaling pathway through PD. One-sentence summaryPlant-specific coatomer protein functions as a negative regulator of callose accumulation by regulating the translocation of sphingolipid enzymes.

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
Journal of Genetics and Genomics
36 papers in training set
Top 0.1%
12.5%
2
eLife
5422 papers in training set
Top 6%
10.1%
3
New Phytologist
309 papers in training set
Top 0.9%
6.8%
4
Plant Physiology
217 papers in training set
Top 0.7%
6.3%
5
Cell Discovery
54 papers in training set
Top 0.9%
4.9%
6
Journal of Experimental Botany
195 papers in training set
Top 0.9%
4.9%
7
Genomics, Proteomics & Bioinformatics
171 papers in training set
Top 1%
4.3%
8
Protein & Cell
25 papers in training set
Top 0.6%
3.6%
50% of probability mass above
9
Cell Structure and Function
11 papers in training set
Top 0.1%
3.3%
10
Frontiers in Plant Science
240 papers in training set
Top 3%
2.7%
11
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 3%
2.4%
12
PLOS Genetics
756 papers in training set
Top 7%
2.1%
13
PLOS ONE
4510 papers in training set
Top 50%
1.9%
14
iScience
1063 papers in training set
Top 12%
1.9%
15
Cell Reports
1338 papers in training set
Top 24%
1.7%
16
The Plant Cell
141 papers in training set
Top 1%
1.7%
17
Current Biology
596 papers in training set
Top 9%
1.7%
18
The Plant Journal
197 papers in training set
Top 2%
1.7%
19
Developmental Cell
168 papers in training set
Top 8%
1.7%
20
Molecular Plant
36 papers in training set
Top 0.8%
1.7%
21
Plant And Cell Physiology
16 papers in training set
Top 0.2%
1.2%
22
Journal of Cell Biology
333 papers in training set
Top 3%
1.1%
23
Plant Communications
35 papers in training set
Top 1%
1.0%
24
PLOS Biology
408 papers in training set
Top 16%
0.9%
25
Advanced Science
249 papers in training set
Top 16%
0.9%
26
Molecular Biology of the Cell
272 papers in training set
Top 2%
0.9%
27
Scientific Reports
3102 papers in training set
Top 73%
0.8%
28
Nature Communications
4913 papers in training set
Top 63%
0.7%
29
Neuroscience Bulletin
11 papers in training set
Top 0.7%
0.7%
30
Journal of Investigative Dermatology
42 papers in training set
Top 0.6%
0.6%