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MYC promotes immune-suppression in TNBC via inhibition of IFN signaling

Zimmerli, D.; Brambillasca, C. S.; Talens, F.; Bhin, J.; Bhattacharya, A.; Joosten, S. E. P.; Moises da Silva, A.; Wellenstein, M. D.; Kersten, K.; de Boo, M.; Roorda, M.; Henneman, L.; de Bruijn, R.; Annunziato, S.; van der Burg, E.; Drenth, A. P.; Lutz, C.; van der Ven, M.; Wessels, L.; de Visser, K. E.; Zwart, W.; Fehrmann, R. S. N.; van Vugt, M. A. T. M.; Jonkers, J.

2021-02-24 cancer biology
10.1101/2021.02.24.432659 bioRxiv
Show abstract

Immune checkpoint inhibitor (ICI) treatment has thus far shown limited efficacy in triple-negative breast cancer (TNBC) patients, presumably due to sparse or unresponsive tumor-infiltrating lymphocytes. We reveal a strong correlation between MYC expression and loss of immune signatures in human TNBC. In mouse models of BRCA1-proficient and -deficient TNBC, MYC overexpression dramatically decreased lymphocyte infiltration in tumors, along with immune signature loss. Likewise, MYC overexpression suppressed inflammatory signaling induced by BRCA1/2 inactivation in human TNBC cell lines. Moreover, MYC overexpression prevented the recruitment and activation of lymphocytes in co-cultures with human and mouse TNBC models. Chromatin immunoprecipitation (ChIP)-sequencing revealed that MYC directly binds promoters of multiple interferon-signaling genes, which were downregulated upon MYC expression. Finally, MYC overexpression suppressed induction of interferon signaling and tumor growth inhibition by a Stimulator of Interferon Genes (STING) agonist. Together, our data reveal that MYC suppresses innate immunity and facilitates immune escape, explaining the poor immunogenicity of MYC-overexpressing TNBCs. Statement of SignificanceMYC suppresses recruitment and activation of immune cells in TNBC by repressing the transcription of interferon genes. These findings provide a mechanistic rationale for the association of high MYC expression levels with immune exclusion in human TNBCs, which might underlie the relatively poor response of many TNBCs to ICI.

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